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Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales

When exposed to a thermal gradient, reaction networks can convert thermal energy into the chemical selection of states that would be unfavourable at equilibrium. The kinetics of reaction paths, and thus how fast they dissipate available energy, might be dominant in dictating the stationary populatio...

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Autores principales: Liang, Shiling, De Los Rios, Paolo, Busiello, Daniel Maria
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8394842/
https://www.ncbi.nlm.nih.gov/pubmed/34441208
http://dx.doi.org/10.3390/e23081068
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author Liang, Shiling
De Los Rios, Paolo
Busiello, Daniel Maria
author_facet Liang, Shiling
De Los Rios, Paolo
Busiello, Daniel Maria
author_sort Liang, Shiling
collection PubMed
description When exposed to a thermal gradient, reaction networks can convert thermal energy into the chemical selection of states that would be unfavourable at equilibrium. The kinetics of reaction paths, and thus how fast they dissipate available energy, might be dominant in dictating the stationary populations of all chemical states out of equilibrium. This phenomenology has been theoretically explored mainly in the infinite diffusion limit. Here, we show that the regime in which the diffusion rate is finite, and also slower than some chemical reactions, might bring about interesting features, such as the maximisation of selection or the switch of the selected state at stationarity. We introduce a framework, rooted in a time-scale separation analysis, which is able to capture leading non-equilibrium features using only equilibrium arguments under well-defined conditions. In particular, it is possible to identify fast-dissipation sub-networks of reactions whose Boltzmann equilibrium dominates the steady-state of the entire system as a whole. Finally, we also show that the dissipated heat (and so the entropy production) can be estimated, under some approximations, through the heat capacity of fast-dissipation sub-networks. This work provides a tool to develop an intuitive equilibrium-based grasp on complex non-isothermal reaction networks, which are important paradigms to understand the emergence of complex structures from basic building blocks.
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spelling pubmed-83948422021-08-28 Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales Liang, Shiling De Los Rios, Paolo Busiello, Daniel Maria Entropy (Basel) Article When exposed to a thermal gradient, reaction networks can convert thermal energy into the chemical selection of states that would be unfavourable at equilibrium. The kinetics of reaction paths, and thus how fast they dissipate available energy, might be dominant in dictating the stationary populations of all chemical states out of equilibrium. This phenomenology has been theoretically explored mainly in the infinite diffusion limit. Here, we show that the regime in which the diffusion rate is finite, and also slower than some chemical reactions, might bring about interesting features, such as the maximisation of selection or the switch of the selected state at stationarity. We introduce a framework, rooted in a time-scale separation analysis, which is able to capture leading non-equilibrium features using only equilibrium arguments under well-defined conditions. In particular, it is possible to identify fast-dissipation sub-networks of reactions whose Boltzmann equilibrium dominates the steady-state of the entire system as a whole. Finally, we also show that the dissipated heat (and so the entropy production) can be estimated, under some approximations, through the heat capacity of fast-dissipation sub-networks. This work provides a tool to develop an intuitive equilibrium-based grasp on complex non-isothermal reaction networks, which are important paradigms to understand the emergence of complex structures from basic building blocks. MDPI 2021-08-17 /pmc/articles/PMC8394842/ /pubmed/34441208 http://dx.doi.org/10.3390/e23081068 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Liang, Shiling
De Los Rios, Paolo
Busiello, Daniel Maria
Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title_full Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title_fullStr Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title_full_unstemmed Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title_short Dissipation-Driven Selection under Finite Diffusion: Hints from Equilibrium and Separation of Time Scales
title_sort dissipation-driven selection under finite diffusion: hints from equilibrium and separation of time scales
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8394842/
https://www.ncbi.nlm.nih.gov/pubmed/34441208
http://dx.doi.org/10.3390/e23081068
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