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Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)

Celery (Apium graveolens L.) is an important leafy vegetable worldwide. The development of F(1) hybrids in celery is highly dependent on cytoplasmic male sterility (CMS) because emasculation is difficult. In this study, we first report a celery CMS, which was found in a high-generation inbred line p...

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Autores principales: Cheng, Qing, Wang, Peng, Li, Tiantian, Liu, Jinkui, Zhang, Yingxue, Wang, Yihao, Sun, Liang, Shen, Huolin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8395238/
https://www.ncbi.nlm.nih.gov/pubmed/34445290
http://dx.doi.org/10.3390/ijms22168584
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author Cheng, Qing
Wang, Peng
Li, Tiantian
Liu, Jinkui
Zhang, Yingxue
Wang, Yihao
Sun, Liang
Shen, Huolin
author_facet Cheng, Qing
Wang, Peng
Li, Tiantian
Liu, Jinkui
Zhang, Yingxue
Wang, Yihao
Sun, Liang
Shen, Huolin
author_sort Cheng, Qing
collection PubMed
description Celery (Apium graveolens L.) is an important leafy vegetable worldwide. The development of F(1) hybrids in celery is highly dependent on cytoplasmic male sterility (CMS) because emasculation is difficult. In this study, we first report a celery CMS, which was found in a high-generation inbred line population of the Chinese celery “tanzhixiangqin”. Comparative analysis, following sequencing and assembly of the complete mitochondrial genome sequences for this celery CMS line and its maintainer line, revealed that there are 21 unique regions in the celery CMS line and these unique regions contain 15 ORFs. Among these ORFs, only orf768a is a chimeric gene, consisting of 1497 bp sequences of the cox1 gene and 810 bp unidentified sequences located in the unique region, and the predicted protein product of orf768a possesses 11 transmembrane domains. In summary, the results of this study indicate that orf768a is likely to be a strong candidate gene for CMS induction in celery. In addition, orf768a can be a co-segregate marker, which can be used to screen CMS in celery.
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spelling pubmed-83952382021-08-28 Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.) Cheng, Qing Wang, Peng Li, Tiantian Liu, Jinkui Zhang, Yingxue Wang, Yihao Sun, Liang Shen, Huolin Int J Mol Sci Article Celery (Apium graveolens L.) is an important leafy vegetable worldwide. The development of F(1) hybrids in celery is highly dependent on cytoplasmic male sterility (CMS) because emasculation is difficult. In this study, we first report a celery CMS, which was found in a high-generation inbred line population of the Chinese celery “tanzhixiangqin”. Comparative analysis, following sequencing and assembly of the complete mitochondrial genome sequences for this celery CMS line and its maintainer line, revealed that there are 21 unique regions in the celery CMS line and these unique regions contain 15 ORFs. Among these ORFs, only orf768a is a chimeric gene, consisting of 1497 bp sequences of the cox1 gene and 810 bp unidentified sequences located in the unique region, and the predicted protein product of orf768a possesses 11 transmembrane domains. In summary, the results of this study indicate that orf768a is likely to be a strong candidate gene for CMS induction in celery. In addition, orf768a can be a co-segregate marker, which can be used to screen CMS in celery. MDPI 2021-08-10 /pmc/articles/PMC8395238/ /pubmed/34445290 http://dx.doi.org/10.3390/ijms22168584 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Cheng, Qing
Wang, Peng
Li, Tiantian
Liu, Jinkui
Zhang, Yingxue
Wang, Yihao
Sun, Liang
Shen, Huolin
Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title_full Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title_fullStr Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title_full_unstemmed Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title_short Complete Mitochondrial Genome Sequence and Identification of a Candidate Gene Responsible for Cytoplasmic Male Sterility in Celery (Apium graveolens L.)
title_sort complete mitochondrial genome sequence and identification of a candidate gene responsible for cytoplasmic male sterility in celery (apium graveolens l.)
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8395238/
https://www.ncbi.nlm.nih.gov/pubmed/34445290
http://dx.doi.org/10.3390/ijms22168584
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