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Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium

DyP-type peroxidases are a family of heme peroxidases named for their ability to degrade persistent anthraquinone dyes. DyP-type peroxidases are subclassified into three classes: classes P, I and V. Based on its genome sequence, Streptomyces avermitilis, eubacteria, has two genes presumed to encode...

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Autores principales: Sugawara, Kanako, Yoshida, Toru, Hirashima, Rena, Toriumi, Ryoko, Akiyama, Hotaka, Kakuta, Yurika, Ishige, Yuki, Sugano, Yasushi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8395514/
https://www.ncbi.nlm.nih.gov/pubmed/34445389
http://dx.doi.org/10.3390/ijms22168683
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author Sugawara, Kanako
Yoshida, Toru
Hirashima, Rena
Toriumi, Ryoko
Akiyama, Hotaka
Kakuta, Yurika
Ishige, Yuki
Sugano, Yasushi
author_facet Sugawara, Kanako
Yoshida, Toru
Hirashima, Rena
Toriumi, Ryoko
Akiyama, Hotaka
Kakuta, Yurika
Ishige, Yuki
Sugano, Yasushi
author_sort Sugawara, Kanako
collection PubMed
description DyP-type peroxidases are a family of heme peroxidases named for their ability to degrade persistent anthraquinone dyes. DyP-type peroxidases are subclassified into three classes: classes P, I and V. Based on its genome sequence, Streptomyces avermitilis, eubacteria, has two genes presumed to encode class V DyP-type peroxidases and two class I genes. We have previously shown that ectopically expressed SaDyP2, a member of class V, indeed has the characteristics of a DyP-type peroxidase. In this study, we analyzed SaDyP1, a member of the same class V as SaDyP2. SaDyP1 showed high amino acid sequence identity to SaDyP2, retaining a conserved GXXDG motif and catalytic aspartate. SaDyP1 degraded anthraquinone dyes, which are specific substrates of DyP-type peroxidases but not azo dyes. In addition to such substrate specificity, SaDyP1 showed other features of DyP-type peroxidases, such as low optimal pH. Furthermore, immunoblotting using an anti-SaDyP2 polyclonal antibody revealed that SaDyP1 and/or SaDyP2 is expressed in mycelia of wild-type S. avermitilis.
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spelling pubmed-83955142021-08-28 Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium Sugawara, Kanako Yoshida, Toru Hirashima, Rena Toriumi, Ryoko Akiyama, Hotaka Kakuta, Yurika Ishige, Yuki Sugano, Yasushi Int J Mol Sci Article DyP-type peroxidases are a family of heme peroxidases named for their ability to degrade persistent anthraquinone dyes. DyP-type peroxidases are subclassified into three classes: classes P, I and V. Based on its genome sequence, Streptomyces avermitilis, eubacteria, has two genes presumed to encode class V DyP-type peroxidases and two class I genes. We have previously shown that ectopically expressed SaDyP2, a member of class V, indeed has the characteristics of a DyP-type peroxidase. In this study, we analyzed SaDyP1, a member of the same class V as SaDyP2. SaDyP1 showed high amino acid sequence identity to SaDyP2, retaining a conserved GXXDG motif and catalytic aspartate. SaDyP1 degraded anthraquinone dyes, which are specific substrates of DyP-type peroxidases but not azo dyes. In addition to such substrate specificity, SaDyP1 showed other features of DyP-type peroxidases, such as low optimal pH. Furthermore, immunoblotting using an anti-SaDyP2 polyclonal antibody revealed that SaDyP1 and/or SaDyP2 is expressed in mycelia of wild-type S. avermitilis. MDPI 2021-08-12 /pmc/articles/PMC8395514/ /pubmed/34445389 http://dx.doi.org/10.3390/ijms22168683 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Sugawara, Kanako
Yoshida, Toru
Hirashima, Rena
Toriumi, Ryoko
Akiyama, Hotaka
Kakuta, Yurika
Ishige, Yuki
Sugano, Yasushi
Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title_full Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title_fullStr Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title_full_unstemmed Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title_short Characterization of Class V DyP-Type Peroxidase SaDyP1 from Streptomyces avermitilis and Evaluation of SaDyPs Expression in Mycelium
title_sort characterization of class v dyp-type peroxidase sadyp1 from streptomyces avermitilis and evaluation of sadyps expression in mycelium
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8395514/
https://www.ncbi.nlm.nih.gov/pubmed/34445389
http://dx.doi.org/10.3390/ijms22168683
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