Cargando…
Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L.
Jasmonate ZIM-domain (JAZ) proteins are the crucial transcriptional repressors in the jasmonic acid (JA) signaling process, and they play pervasive roles in plant development, defense, and plant specialized metabolism. Although numerous JAZ gene families have been discovered across several plants, o...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8396335/ https://www.ncbi.nlm.nih.gov/pubmed/34445565 http://dx.doi.org/10.3390/ijms22168859 |
_version_ | 1783744350092525568 |
---|---|
author | Xu, Dong-Bei Ma, Ya-Nan Qin, Teng-Fei Tang, Wei-Lin Qi, Xi-Wu Wang, Xia Liu, Rui-Cen Fang, Hai-Ling Chen, Ze-Qun Liang, Cheng-Yuan Wu, Wei |
author_facet | Xu, Dong-Bei Ma, Ya-Nan Qin, Teng-Fei Tang, Wei-Lin Qi, Xi-Wu Wang, Xia Liu, Rui-Cen Fang, Hai-Ling Chen, Ze-Qun Liang, Cheng-Yuan Wu, Wei |
author_sort | Xu, Dong-Bei |
collection | PubMed |
description | Jasmonate ZIM-domain (JAZ) proteins are the crucial transcriptional repressors in the jasmonic acid (JA) signaling process, and they play pervasive roles in plant development, defense, and plant specialized metabolism. Although numerous JAZ gene families have been discovered across several plants, our knowledge about the JAZ gene family remains limited in the economically and medicinally important Chinese herb Mentha canadensis L. Here, seven non-redundant JAZ genes named McJAZ1–McJAZ7 were identified from our reported M. canadensis transcriptome data. Structural, amino acid composition, and phylogenetic analysis showed that seven McJAZ proteins contained the typical zinc-finger inflorescence meristem (ZIM) domain and JA-associated (Jas) domain as conserved as those in other plants, and they were clustered into four groups (A-D) and distributed into five subgroups (A1, A2, B1, B2, and D). Quantitative real-time PCR (qRT-PCR) analysis showed that seven McJAZ genes displayed differential expression patterns in M. canadensis tissues, and preferentially expressed in flowers. Furthermore, the McJAZ genes expression was differentially induced after Methyl jasmonate (MeJA) treatment, and their transcripts were variable and up- or down-regulated under abscisic acid (ABA), drought, and salt treatments. Subcellular localization analysis revealed that McJAZ proteins are localized in the nucleus or cytoplasm. Yeast two-hybrid (Y2H) assays demonstrated that McJAZ1-5 interacted with McCOI1a, a homolog of Arabidopsis JA receptor AtCOI1, in a coronatine-dependent manner, and most of McJAZ proteins could also form homo- or heterodimers. This present study provides valuable basis for functional analysis and exploitation of the potential candidate McJAZ genes for developing efficient strategies for genetic improvement of M. canadensis. |
format | Online Article Text |
id | pubmed-8396335 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-83963352021-08-28 Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. Xu, Dong-Bei Ma, Ya-Nan Qin, Teng-Fei Tang, Wei-Lin Qi, Xi-Wu Wang, Xia Liu, Rui-Cen Fang, Hai-Ling Chen, Ze-Qun Liang, Cheng-Yuan Wu, Wei Int J Mol Sci Article Jasmonate ZIM-domain (JAZ) proteins are the crucial transcriptional repressors in the jasmonic acid (JA) signaling process, and they play pervasive roles in plant development, defense, and plant specialized metabolism. Although numerous JAZ gene families have been discovered across several plants, our knowledge about the JAZ gene family remains limited in the economically and medicinally important Chinese herb Mentha canadensis L. Here, seven non-redundant JAZ genes named McJAZ1–McJAZ7 were identified from our reported M. canadensis transcriptome data. Structural, amino acid composition, and phylogenetic analysis showed that seven McJAZ proteins contained the typical zinc-finger inflorescence meristem (ZIM) domain and JA-associated (Jas) domain as conserved as those in other plants, and they were clustered into four groups (A-D) and distributed into five subgroups (A1, A2, B1, B2, and D). Quantitative real-time PCR (qRT-PCR) analysis showed that seven McJAZ genes displayed differential expression patterns in M. canadensis tissues, and preferentially expressed in flowers. Furthermore, the McJAZ genes expression was differentially induced after Methyl jasmonate (MeJA) treatment, and their transcripts were variable and up- or down-regulated under abscisic acid (ABA), drought, and salt treatments. Subcellular localization analysis revealed that McJAZ proteins are localized in the nucleus or cytoplasm. Yeast two-hybrid (Y2H) assays demonstrated that McJAZ1-5 interacted with McCOI1a, a homolog of Arabidopsis JA receptor AtCOI1, in a coronatine-dependent manner, and most of McJAZ proteins could also form homo- or heterodimers. This present study provides valuable basis for functional analysis and exploitation of the potential candidate McJAZ genes for developing efficient strategies for genetic improvement of M. canadensis. MDPI 2021-08-17 /pmc/articles/PMC8396335/ /pubmed/34445565 http://dx.doi.org/10.3390/ijms22168859 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xu, Dong-Bei Ma, Ya-Nan Qin, Teng-Fei Tang, Wei-Lin Qi, Xi-Wu Wang, Xia Liu, Rui-Cen Fang, Hai-Ling Chen, Ze-Qun Liang, Cheng-Yuan Wu, Wei Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title | Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title_full | Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title_fullStr | Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title_full_unstemmed | Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title_short | Transcriptome-Wide Identification and Characterization of the JAZ Gene Family in Mentha canadensis L. |
title_sort | transcriptome-wide identification and characterization of the jaz gene family in mentha canadensis l. |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8396335/ https://www.ncbi.nlm.nih.gov/pubmed/34445565 http://dx.doi.org/10.3390/ijms22168859 |
work_keys_str_mv | AT xudongbei transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT mayanan transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT qintengfei transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT tangweilin transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT qixiwu transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT wangxia transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT liuruicen transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT fanghailing transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT chenzequn transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT liangchengyuan transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl AT wuwei transcriptomewideidentificationandcharacterizationofthejazgenefamilyinmenthacanadensisl |