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Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection

Hepatitis is an inflammatory condition of the liver, which is frequently caused by the infection of hepatitis B virus (HBV) or hepatitis C virus (HCV). Hepatitis can lead to the development of chronic complications including cancer, making it a major public health burden. Co-infection of HBV and HCV...

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Autores principales: Huang, Xubo, Glessner, Joseph T., Huang, Jinxia, Zhou, Desheng, March, Michael E., Wang, Hongna, Xia, Qianghua, Hakonarson, Hakon, Li, Jin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8397444/
https://www.ncbi.nlm.nih.gov/pubmed/34458256
http://dx.doi.org/10.3389/fcell.2021.690882
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author Huang, Xubo
Glessner, Joseph T.
Huang, Jinxia
Zhou, Desheng
March, Michael E.
Wang, Hongna
Xia, Qianghua
Hakonarson, Hakon
Li, Jin
author_facet Huang, Xubo
Glessner, Joseph T.
Huang, Jinxia
Zhou, Desheng
March, Michael E.
Wang, Hongna
Xia, Qianghua
Hakonarson, Hakon
Li, Jin
author_sort Huang, Xubo
collection PubMed
description Hepatitis is an inflammatory condition of the liver, which is frequently caused by the infection of hepatitis B virus (HBV) or hepatitis C virus (HCV). Hepatitis can lead to the development of chronic complications including cancer, making it a major public health burden. Co-infection of HBV and HCV can result in faster disease progression. Therefore, it is important to identify shared genetic susceptibility loci for HBV and HCV infection to further understand the underlying mechanism. Through a meta-analysis based on genome-wide association summary statistics of HBV and HCV infection, we found one novel locus in the Asian population and two novel loci in the European population. By functional annotation based on multi-omics data, we identified the likely target genes at each novel locus, such as HMGB1 and ATF3, which play a critical role in autophagy and immune response to virus. By re-analyzing a microarray dataset from Hmgb1(–/–) mice and RNA-seq data from mouse liver tissue overexpressing ATF3, we found that differential expression of autophagy and immune and metabolic gene pathways underlie these conditions. Our study reveals novel common susceptibility loci to HBV and HCV infection, supporting their role in linking autophagy signaling and immune response.
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spelling pubmed-83974442021-08-28 Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection Huang, Xubo Glessner, Joseph T. Huang, Jinxia Zhou, Desheng March, Michael E. Wang, Hongna Xia, Qianghua Hakonarson, Hakon Li, Jin Front Cell Dev Biol Cell and Developmental Biology Hepatitis is an inflammatory condition of the liver, which is frequently caused by the infection of hepatitis B virus (HBV) or hepatitis C virus (HCV). Hepatitis can lead to the development of chronic complications including cancer, making it a major public health burden. Co-infection of HBV and HCV can result in faster disease progression. Therefore, it is important to identify shared genetic susceptibility loci for HBV and HCV infection to further understand the underlying mechanism. Through a meta-analysis based on genome-wide association summary statistics of HBV and HCV infection, we found one novel locus in the Asian population and two novel loci in the European population. By functional annotation based on multi-omics data, we identified the likely target genes at each novel locus, such as HMGB1 and ATF3, which play a critical role in autophagy and immune response to virus. By re-analyzing a microarray dataset from Hmgb1(–/–) mice and RNA-seq data from mouse liver tissue overexpressing ATF3, we found that differential expression of autophagy and immune and metabolic gene pathways underlie these conditions. Our study reveals novel common susceptibility loci to HBV and HCV infection, supporting their role in linking autophagy signaling and immune response. Frontiers Media S.A. 2021-08-12 /pmc/articles/PMC8397444/ /pubmed/34458256 http://dx.doi.org/10.3389/fcell.2021.690882 Text en Copyright © 2021 Huang, Glessner, Huang, Zhou, March, Wang, Xia, Hakonarson and Li. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Huang, Xubo
Glessner, Joseph T.
Huang, Jinxia
Zhou, Desheng
March, Michael E.
Wang, Hongna
Xia, Qianghua
Hakonarson, Hakon
Li, Jin
Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title_full Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title_fullStr Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title_full_unstemmed Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title_short Discovery of Novel Host Molecular Factors Underlying HBV/HCV Infection
title_sort discovery of novel host molecular factors underlying hbv/hcv infection
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8397444/
https://www.ncbi.nlm.nih.gov/pubmed/34458256
http://dx.doi.org/10.3389/fcell.2021.690882
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