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Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension

The inner viscosity of a biological red blood cell is about five times larger than the viscosity of the blood plasma. In this work, we use dissipative particles to enable the proper viscosity contrast in a mesh-based red blood cell model. Each soft particle represents a coarse-grained virtual cluste...

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Autores principales: Bohiniková, Alžbeta, Jančigová, Iveta, Cimrák, Ivan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8398941/
https://www.ncbi.nlm.nih.gov/pubmed/34442596
http://dx.doi.org/10.3390/mi12080974
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author Bohiniková, Alžbeta
Jančigová, Iveta
Cimrák, Ivan
author_facet Bohiniková, Alžbeta
Jančigová, Iveta
Cimrák, Ivan
author_sort Bohiniková, Alžbeta
collection PubMed
description The inner viscosity of a biological red blood cell is about five times larger than the viscosity of the blood plasma. In this work, we use dissipative particles to enable the proper viscosity contrast in a mesh-based red blood cell model. Each soft particle represents a coarse-grained virtual cluster of hemoglobin proteins contained in the cytosol of the red blood cell. The particle interactions are governed by conservative and dissipative forces. The conservative forces have purely repulsive character, whereas the dissipative forces depend on the relative velocity between the particles. We design two computational experiments that mimic the classical viscometers. With these experiments we study the effects of particle suspension parameters on the inner cell viscosity and provide parameter sets that result in the correct viscosity contrast. The results are validated with both static and dynamic biological experiment, showing an improvement in the accuracy of the original model without major increase in computational complexity.
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spelling pubmed-83989412021-08-29 Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension Bohiniková, Alžbeta Jančigová, Iveta Cimrák, Ivan Micromachines (Basel) Article The inner viscosity of a biological red blood cell is about five times larger than the viscosity of the blood plasma. In this work, we use dissipative particles to enable the proper viscosity contrast in a mesh-based red blood cell model. Each soft particle represents a coarse-grained virtual cluster of hemoglobin proteins contained in the cytosol of the red blood cell. The particle interactions are governed by conservative and dissipative forces. The conservative forces have purely repulsive character, whereas the dissipative forces depend on the relative velocity between the particles. We design two computational experiments that mimic the classical viscometers. With these experiments we study the effects of particle suspension parameters on the inner cell viscosity and provide parameter sets that result in the correct viscosity contrast. The results are validated with both static and dynamic biological experiment, showing an improvement in the accuracy of the original model without major increase in computational complexity. MDPI 2021-08-18 /pmc/articles/PMC8398941/ /pubmed/34442596 http://dx.doi.org/10.3390/mi12080974 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bohiniková, Alžbeta
Jančigová, Iveta
Cimrák, Ivan
Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title_full Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title_fullStr Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title_full_unstemmed Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title_short Modeling Red Blood Cell Viscosity Contrast Using Inner Soft Particle Suspension
title_sort modeling red blood cell viscosity contrast using inner soft particle suspension
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8398941/
https://www.ncbi.nlm.nih.gov/pubmed/34442596
http://dx.doi.org/10.3390/mi12080974
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