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Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics

Shearing stresses are known to be a critical factor impacting the growth and physiology of biofilms, but the underlying fluid dynamics within biofilm reactors are rarely well characterized and not always considered when a researcher decides which biofilm reactor to use. The CDC biofilm reactor is re...

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Autores principales: Johnson, Erick, Petersen, Theodore, Goeres, Darla M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8399442/
https://www.ncbi.nlm.nih.gov/pubmed/34442788
http://dx.doi.org/10.3390/microorganisms9081709
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author Johnson, Erick
Petersen, Theodore
Goeres, Darla M.
author_facet Johnson, Erick
Petersen, Theodore
Goeres, Darla M.
author_sort Johnson, Erick
collection PubMed
description Shearing stresses are known to be a critical factor impacting the growth and physiology of biofilms, but the underlying fluid dynamics within biofilm reactors are rarely well characterized and not always considered when a researcher decides which biofilm reactor to use. The CDC biofilm reactor is referenced in validated Standard Test Methods and US EPA guidance documents. The driving fluid dynamics within the CDC biofilm reactor were investigated using computational fluid dynamics. An unsteady, three-dimensional model of the CDC reactor was simulated at a rotation rate of 125 RPM. The reactor showed turbulent structures, with shear stresses averaging near 0.365 ± 0.074 Pa across all 24 coupons. The pressure variation on the coupon surfaces was found to be larger, with a continuous 2–3 Pa amplitude, coinciding with the baffle passage. Computational fluid dynamics was shown to be a powerful tool for defining key fluid dynamic parameters at a high fidelity within the CDC biofilm reactor. The consistency of the shear stresses and pressures and the unsteadiness of the flow within the CDC reactor may help explain its reproducibility in laboratory studies. The computational model will enable researchers to make an informed decision whether the fluid dynamics present in the CDC biofilm reactor are appropriate for their research.
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spelling pubmed-83994422021-08-29 Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics Johnson, Erick Petersen, Theodore Goeres, Darla M. Microorganisms Article Shearing stresses are known to be a critical factor impacting the growth and physiology of biofilms, but the underlying fluid dynamics within biofilm reactors are rarely well characterized and not always considered when a researcher decides which biofilm reactor to use. The CDC biofilm reactor is referenced in validated Standard Test Methods and US EPA guidance documents. The driving fluid dynamics within the CDC biofilm reactor were investigated using computational fluid dynamics. An unsteady, three-dimensional model of the CDC reactor was simulated at a rotation rate of 125 RPM. The reactor showed turbulent structures, with shear stresses averaging near 0.365 ± 0.074 Pa across all 24 coupons. The pressure variation on the coupon surfaces was found to be larger, with a continuous 2–3 Pa amplitude, coinciding with the baffle passage. Computational fluid dynamics was shown to be a powerful tool for defining key fluid dynamic parameters at a high fidelity within the CDC biofilm reactor. The consistency of the shear stresses and pressures and the unsteadiness of the flow within the CDC reactor may help explain its reproducibility in laboratory studies. The computational model will enable researchers to make an informed decision whether the fluid dynamics present in the CDC biofilm reactor are appropriate for their research. MDPI 2021-08-11 /pmc/articles/PMC8399442/ /pubmed/34442788 http://dx.doi.org/10.3390/microorganisms9081709 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Johnson, Erick
Petersen, Theodore
Goeres, Darla M.
Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title_full Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title_fullStr Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title_full_unstemmed Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title_short Characterizing the Shearing Stresses within the CDC Biofilm Reactor Using Computational Fluid Dynamics
title_sort characterizing the shearing stresses within the cdc biofilm reactor using computational fluid dynamics
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8399442/
https://www.ncbi.nlm.nih.gov/pubmed/34442788
http://dx.doi.org/10.3390/microorganisms9081709
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