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Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures

This paper investigates the classification of radiographic images with eleven convolutional neural network (CNN) architectures (GoogleNet, VGG-19, AlexNet, SqueezeNet, ResNet-18, Inception-v3, ResNet-50, VGG-16, ResNet-101, DenseNet-201 and Inception-ResNet-v2). The CNNs were used to classify a seri...

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Autores principales: Ananda, Ananda, Ngan, Kwun Ho, Karabağ, Cefa, Ter-Sarkisov, Aram, Alonso, Eduardo, Reyes-Aldasoro, Constantino Carlos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8400172/
https://www.ncbi.nlm.nih.gov/pubmed/34450821
http://dx.doi.org/10.3390/s21165381
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author Ananda, Ananda
Ngan, Kwun Ho
Karabağ, Cefa
Ter-Sarkisov, Aram
Alonso, Eduardo
Reyes-Aldasoro, Constantino Carlos
author_facet Ananda, Ananda
Ngan, Kwun Ho
Karabağ, Cefa
Ter-Sarkisov, Aram
Alonso, Eduardo
Reyes-Aldasoro, Constantino Carlos
author_sort Ananda, Ananda
collection PubMed
description This paper investigates the classification of radiographic images with eleven convolutional neural network (CNN) architectures (GoogleNet, VGG-19, AlexNet, SqueezeNet, ResNet-18, Inception-v3, ResNet-50, VGG-16, ResNet-101, DenseNet-201 and Inception-ResNet-v2). The CNNs were used to classify a series of wrist radiographs from the Stanford Musculoskeletal Radiographs (MURA) dataset into two classes—normal and abnormal. The architectures were compared for different hyper-parameters against accuracy and Cohen’s kappa coefficient. The best two results were then explored with data augmentation. Without the use of augmentation, the best results were provided by Inception-ResNet-v2 (Mean accuracy = 0.723, Mean kappa = 0.506). These were significantly improved with augmentation to Inception-ResNet-v2 (Mean accuracy = 0.857, Mean kappa = 0.703). Finally, Class Activation Mapping was applied to interpret activation of the network against the location of an anomaly in the radiographs.
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spelling pubmed-84001722021-08-29 Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures Ananda, Ananda Ngan, Kwun Ho Karabağ, Cefa Ter-Sarkisov, Aram Alonso, Eduardo Reyes-Aldasoro, Constantino Carlos Sensors (Basel) Article This paper investigates the classification of radiographic images with eleven convolutional neural network (CNN) architectures (GoogleNet, VGG-19, AlexNet, SqueezeNet, ResNet-18, Inception-v3, ResNet-50, VGG-16, ResNet-101, DenseNet-201 and Inception-ResNet-v2). The CNNs were used to classify a series of wrist radiographs from the Stanford Musculoskeletal Radiographs (MURA) dataset into two classes—normal and abnormal. The architectures were compared for different hyper-parameters against accuracy and Cohen’s kappa coefficient. The best two results were then explored with data augmentation. Without the use of augmentation, the best results were provided by Inception-ResNet-v2 (Mean accuracy = 0.723, Mean kappa = 0.506). These were significantly improved with augmentation to Inception-ResNet-v2 (Mean accuracy = 0.857, Mean kappa = 0.703). Finally, Class Activation Mapping was applied to interpret activation of the network against the location of an anomaly in the radiographs. MDPI 2021-08-09 /pmc/articles/PMC8400172/ /pubmed/34450821 http://dx.doi.org/10.3390/s21165381 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ananda, Ananda
Ngan, Kwun Ho
Karabağ, Cefa
Ter-Sarkisov, Aram
Alonso, Eduardo
Reyes-Aldasoro, Constantino Carlos
Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title_full Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title_fullStr Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title_full_unstemmed Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title_short Classification and Visualisation of Normal and Abnormal Radiographs; A Comparison between Eleven Convolutional Neural Network Architectures
title_sort classification and visualisation of normal and abnormal radiographs; a comparison between eleven convolutional neural network architectures
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8400172/
https://www.ncbi.nlm.nih.gov/pubmed/34450821
http://dx.doi.org/10.3390/s21165381
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