Cargando…
Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria
Tolyporphins A–R are unusual tetrapyrrole macrocycles produced by the non-axenic filamentous cyanobacterium HT-58-2. A putative biosynthetic gene cluster for biosynthesis of tolyporphins (here termed BGC-1) was previously identified in the genome of HT-58-2. Here, homology searching of BGC-1 in HT-5...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8401325/ https://www.ncbi.nlm.nih.gov/pubmed/34440502 http://dx.doi.org/10.3390/life11080758 |
_version_ | 1783745524400128000 |
---|---|
author | Jin, Xiaohe Zhang, Yunlong Zhang, Ran Nguyen, Kathy-Uyen Lindsey, Jonathan S. Miller, Eric S. |
author_facet | Jin, Xiaohe Zhang, Yunlong Zhang, Ran Nguyen, Kathy-Uyen Lindsey, Jonathan S. Miller, Eric S. |
author_sort | Jin, Xiaohe |
collection | PubMed |
description | Tolyporphins A–R are unusual tetrapyrrole macrocycles produced by the non-axenic filamentous cyanobacterium HT-58-2. A putative biosynthetic gene cluster for biosynthesis of tolyporphins (here termed BGC-1) was previously identified in the genome of HT-58-2. Here, homology searching of BGC-1 in HT-58-2 led to identification of similar BGCs in seven other filamentous cyanobacteria, including strains Nostoc sp. 106C, Nostoc sp. RF31YmG, Nostoc sp. FACHB-892, Brasilonema octagenarum UFV-OR1, Brasilonema octagenarum UFV-E1, Brasilonema sennae CENA114 and Oculatella sp. LEGE 06141, suggesting their potential for tolyporphins production. A similar gene cluster (BGC-2) also was identified unexpectedly in HT-58-2. Tolyporphins BGCs were not identified in unicellular cyanobacteria. Phylogenetic analysis based on 16S rRNA and a common component of the BGCs, TolD, points to a close evolutionary history between each strain and their respective tolyporphins BGC. Though identified with putative tolyporphins BGCs, examination of pigments extracted from three cyanobacteria has not revealed the presence of tolyporphins. Overall, the identification of BGCs and potential producers of tolyporphins presents a collection of candidate cyanobacteria for genetic and biochemical analysis pertaining to these unusual tetrapyrrole macrocycles. |
format | Online Article Text |
id | pubmed-8401325 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-84013252021-08-29 Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria Jin, Xiaohe Zhang, Yunlong Zhang, Ran Nguyen, Kathy-Uyen Lindsey, Jonathan S. Miller, Eric S. Life (Basel) Article Tolyporphins A–R are unusual tetrapyrrole macrocycles produced by the non-axenic filamentous cyanobacterium HT-58-2. A putative biosynthetic gene cluster for biosynthesis of tolyporphins (here termed BGC-1) was previously identified in the genome of HT-58-2. Here, homology searching of BGC-1 in HT-58-2 led to identification of similar BGCs in seven other filamentous cyanobacteria, including strains Nostoc sp. 106C, Nostoc sp. RF31YmG, Nostoc sp. FACHB-892, Brasilonema octagenarum UFV-OR1, Brasilonema octagenarum UFV-E1, Brasilonema sennae CENA114 and Oculatella sp. LEGE 06141, suggesting their potential for tolyporphins production. A similar gene cluster (BGC-2) also was identified unexpectedly in HT-58-2. Tolyporphins BGCs were not identified in unicellular cyanobacteria. Phylogenetic analysis based on 16S rRNA and a common component of the BGCs, TolD, points to a close evolutionary history between each strain and their respective tolyporphins BGC. Though identified with putative tolyporphins BGCs, examination of pigments extracted from three cyanobacteria has not revealed the presence of tolyporphins. Overall, the identification of BGCs and potential producers of tolyporphins presents a collection of candidate cyanobacteria for genetic and biochemical analysis pertaining to these unusual tetrapyrrole macrocycles. MDPI 2021-07-28 /pmc/articles/PMC8401325/ /pubmed/34440502 http://dx.doi.org/10.3390/life11080758 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Jin, Xiaohe Zhang, Yunlong Zhang, Ran Nguyen, Kathy-Uyen Lindsey, Jonathan S. Miller, Eric S. Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title | Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title_full | Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title_fullStr | Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title_full_unstemmed | Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title_short | Identification of Putative Biosynthetic Gene Clusters for Tolyporphins in Multiple Filamentous Cyanobacteria |
title_sort | identification of putative biosynthetic gene clusters for tolyporphins in multiple filamentous cyanobacteria |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8401325/ https://www.ncbi.nlm.nih.gov/pubmed/34440502 http://dx.doi.org/10.3390/life11080758 |
work_keys_str_mv | AT jinxiaohe identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria AT zhangyunlong identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria AT zhangran identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria AT nguyenkathyuyen identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria AT lindseyjonathans identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria AT millererics identificationofputativebiosyntheticgeneclustersfortolyporphinsinmultiplefilamentouscyanobacteria |