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Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing
BACKGROUND: Dystrophic epidermolysis bullosa (DEB) is a rare inherited disorder characterized by skin fragility leading to trauma‐induced subepidermal blisters and healing with scarring. DEB is caused by mutations in COL7A1, the gene encoding for type VII collagen (COLVII). The DEB inheritance trait...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8404230/ https://www.ncbi.nlm.nih.gov/pubmed/34286919 http://dx.doi.org/10.1002/mgg3.1748 |
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author | Ma, Thi Huyen Thuong Luong, Thi Lan Anh Hoang, Thu Lan Nguyen, Thi Thanh Hoa Vu, Thi Ha Tran, Van Khoa Nguyen, Duy Bac Trieu, Tien Sang Nguyen, Hai Ha Nong, Van Hai Nguyen, Dang Ton |
author_facet | Ma, Thi Huyen Thuong Luong, Thi Lan Anh Hoang, Thu Lan Nguyen, Thi Thanh Hoa Vu, Thi Ha Tran, Van Khoa Nguyen, Duy Bac Trieu, Tien Sang Nguyen, Hai Ha Nong, Van Hai Nguyen, Dang Ton |
author_sort | Ma, Thi Huyen Thuong |
collection | PubMed |
description | BACKGROUND: Dystrophic epidermolysis bullosa (DEB) is a rare inherited disorder characterized by skin fragility leading to trauma‐induced subepidermal blisters and healing with scarring. DEB is caused by mutations in COL7A1, the gene encoding for type VII collagen (COLVII). The DEB inheritance trait is divided into dominant dystrophic epidermolysis bullosa (DDEB) and recessive dystrophic epidermolysis bullosa (RDEB). METHODS: Whole‐exome sequencing (WES) was performed for identifying mutations in six affected individuals of five Vietnamese families. RESULTS: Three novel variants in total of eight variants were found in five families. The first novel variant causing glycine substitution (c.8279G>A, p.G2760E), the remaining two novel variants resulted in splice site affecting (c.4518+2delT and c.5821‐2A>G). Functional analysis indicated that the splice site at c.4518+2delT resulted in a skipping of exon 43, leading to an in‐frame deletion of 12 amino acids. CONCLUSION: Our finding expands the spectrum of COL7A1 mutations and reports altered splicing at c.4518+2delT during the processing of the pre‐mRNA. This study provides an additional scientific basis for diagnosis, genetic counseling, and prognosis purposes of EB patients. |
format | Online Article Text |
id | pubmed-8404230 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84042302021-09-03 Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing Ma, Thi Huyen Thuong Luong, Thi Lan Anh Hoang, Thu Lan Nguyen, Thi Thanh Hoa Vu, Thi Ha Tran, Van Khoa Nguyen, Duy Bac Trieu, Tien Sang Nguyen, Hai Ha Nong, Van Hai Nguyen, Dang Ton Mol Genet Genomic Med Original Articles BACKGROUND: Dystrophic epidermolysis bullosa (DEB) is a rare inherited disorder characterized by skin fragility leading to trauma‐induced subepidermal blisters and healing with scarring. DEB is caused by mutations in COL7A1, the gene encoding for type VII collagen (COLVII). The DEB inheritance trait is divided into dominant dystrophic epidermolysis bullosa (DDEB) and recessive dystrophic epidermolysis bullosa (RDEB). METHODS: Whole‐exome sequencing (WES) was performed for identifying mutations in six affected individuals of five Vietnamese families. RESULTS: Three novel variants in total of eight variants were found in five families. The first novel variant causing glycine substitution (c.8279G>A, p.G2760E), the remaining two novel variants resulted in splice site affecting (c.4518+2delT and c.5821‐2A>G). Functional analysis indicated that the splice site at c.4518+2delT resulted in a skipping of exon 43, leading to an in‐frame deletion of 12 amino acids. CONCLUSION: Our finding expands the spectrum of COL7A1 mutations and reports altered splicing at c.4518+2delT during the processing of the pre‐mRNA. This study provides an additional scientific basis for diagnosis, genetic counseling, and prognosis purposes of EB patients. John Wiley and Sons Inc. 2021-07-19 /pmc/articles/PMC8404230/ /pubmed/34286919 http://dx.doi.org/10.1002/mgg3.1748 Text en © 2021 The Authors. Molecular Genetics & Genomic Medicine published by Wiley Periodicals LLC https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made. |
spellingShingle | Original Articles Ma, Thi Huyen Thuong Luong, Thi Lan Anh Hoang, Thu Lan Nguyen, Thi Thanh Hoa Vu, Thi Ha Tran, Van Khoa Nguyen, Duy Bac Trieu, Tien Sang Nguyen, Hai Ha Nong, Van Hai Nguyen, Dang Ton Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title | Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title_full | Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title_fullStr | Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title_full_unstemmed | Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title_short | Novel and very rare causative variants in the COL7A1 gene of Vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
title_sort | novel and very rare causative variants in the col7a1 gene of vietnamese patients with recessive dystrophic epidermolysis bullosa revealed by whole‐exome sequencing |
topic | Original Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8404230/ https://www.ncbi.nlm.nih.gov/pubmed/34286919 http://dx.doi.org/10.1002/mgg3.1748 |
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