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SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia

Cross-replicating associations with rs657152 at the 9q34.2c locus and rs11385942 at the 3p21.31 locus found in patients with severe COVID-19 in the Caucasian population require the study of the discovered phenomenon in various populations, including as an independent biological marker. Primers and T...

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Autores principales: Orlova, E. A., Ogarkov, O. B., Khromova, P. A., Sinkov, V. V., Khasnatinov, M. A., Zhdanova, S. N., Rychkova, L. V., Kolesnikova, L. I.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pleiades Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8404754/
https://www.ncbi.nlm.nih.gov/pubmed/34483600
http://dx.doi.org/10.1134/S1022795421080093
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author Orlova, E. A.
Ogarkov, O. B.
Khromova, P. A.
Sinkov, V. V.
Khasnatinov, M. A.
Zhdanova, S. N.
Rychkova, L. V.
Kolesnikova, L. I.
author_facet Orlova, E. A.
Ogarkov, O. B.
Khromova, P. A.
Sinkov, V. V.
Khasnatinov, M. A.
Zhdanova, S. N.
Rychkova, L. V.
Kolesnikova, L. I.
author_sort Orlova, E. A.
collection PubMed
description Cross-replicating associations with rs657152 at the 9q34.2c locus and rs11385942 at the 3p21.31 locus found in patients with severe COVID-19 in the Caucasian population require the study of the discovered phenomenon in various populations, including as an independent biological marker. Primers and TaqMan probes for PCR discrimination of the A and C alleles in single nucleotide polymorphism (SNP) rs657152 have been developed. The polymorphism of the rs657152 A/C locus was determined in 129 patients with COVID-19 and in a control group of 466 healthy individuals. There were no significant differences in the frequency of distribution of the A and C alleles, 0.47/0.53 and 0.45/0.55, between patients and healthy subjects, respectively. Also, no differences were found in the distribution of alleles in patients with a high viral load in the smear (Ct in the range of 16–25) in comparison with an average and low viral load (Ct in the range of 26–40).
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spelling pubmed-84047542021-08-31 SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia Orlova, E. A. Ogarkov, O. B. Khromova, P. A. Sinkov, V. V. Khasnatinov, M. A. Zhdanova, S. N. Rychkova, L. V. Kolesnikova, L. I. Russ J Genet Short Communications Cross-replicating associations with rs657152 at the 9q34.2c locus and rs11385942 at the 3p21.31 locus found in patients with severe COVID-19 in the Caucasian population require the study of the discovered phenomenon in various populations, including as an independent biological marker. Primers and TaqMan probes for PCR discrimination of the A and C alleles in single nucleotide polymorphism (SNP) rs657152 have been developed. The polymorphism of the rs657152 A/C locus was determined in 129 patients with COVID-19 and in a control group of 466 healthy individuals. There were no significant differences in the frequency of distribution of the A and C alleles, 0.47/0.53 and 0.45/0.55, between patients and healthy subjects, respectively. Also, no differences were found in the distribution of alleles in patients with a high viral load in the smear (Ct in the range of 16–25) in comparison with an average and low viral load (Ct in the range of 26–40). Pleiades Publishing 2021-08-30 2021 /pmc/articles/PMC8404754/ /pubmed/34483600 http://dx.doi.org/10.1134/S1022795421080093 Text en © Pleiades Publishing, Inc. 2021, ISSN 1022-7954, Russian Journal of Genetics, 2021, Vol. 57, No. 8, pp. 982–984. © Pleiades Publishing, Inc., 2021.Russian Text © The Author(s), 2021, published in Genetika, 2021, Vol. 57, No. 8, pp. 974–976. This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Short Communications
Orlova, E. A.
Ogarkov, O. B.
Khromova, P. A.
Sinkov, V. V.
Khasnatinov, M. A.
Zhdanova, S. N.
Rychkova, L. V.
Kolesnikova, L. I.
SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title_full SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title_fullStr SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title_full_unstemmed SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title_short SNP rs657152 Is Not Associated with the Level of Viral Load in COVID-19 or the Probability of Disease in the Population of Caucasians in Eastern Siberia
title_sort snp rs657152 is not associated with the level of viral load in covid-19 or the probability of disease in the population of caucasians in eastern siberia
topic Short Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8404754/
https://www.ncbi.nlm.nih.gov/pubmed/34483600
http://dx.doi.org/10.1134/S1022795421080093
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