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Circulating Exosomal MicroRNA Profiles Associated with Acute Soft Tissue Injury
OBJECTIVE: This study aimed to characterize the circulating exosomal microRNA (miRNA) profiles associated with acute soft tissue injury. MATERIALS AND METHODS: In this experimental study, a total of 12 rats were randomly divided into control group and model group (n=6 for each group). The rats in th...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Royan Institute
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405084/ https://www.ncbi.nlm.nih.gov/pubmed/34455724 http://dx.doi.org/10.22074/cellj.2021.7275 |
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author | Yang, Hongchang Zhou, Jing Wang, Junlei Zhang, Luoning Liu, Quzhi Luo, Jing Jia, Hongyan Liu, Li Zhou, Qiang |
author_facet | Yang, Hongchang Zhou, Jing Wang, Junlei Zhang, Luoning Liu, Quzhi Luo, Jing Jia, Hongyan Liu, Li Zhou, Qiang |
author_sort | Yang, Hongchang |
collection | PubMed |
description | OBJECTIVE: This study aimed to characterize the circulating exosomal microRNA (miRNA) profiles associated with acute soft tissue injury. MATERIALS AND METHODS: In this experimental study, a total of 12 rats were randomly divided into control group and model group (n=6 for each group). The rats in the model group were used to establish an acute soft tissue injury following the mechanical injury of the leg. The exosomes from the peripheral blood of all the rats were isolated and then characterized by Nanosight NS300 particle size analyser (NTA), transmission electron microscopy (TEM) and western blot. Next, the exosomal miRNAs in the control and model groups were sequenced, and the differentially expressed miRNAs (DE-miRNAs) were identified using the DESeq algorithm. Functional analyses were performed using Gene Ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway databases. Finally, quantitative reverse-transcription polymersa chain reaction (qRT-PCR) was used to verify the expression of the DE-miRNAs. RESULTS: TEM, NTA and western blot results showed that the exosomes were approximately 100 nm in size and exhibited cup-shaped morphology. A total of 628 miRNAs were obtained by sequencing. After that, 28 DE miRNAs (DE- miRNAs) were identified, including seven down-regulated miRNAs and 21 up-regulated miRNAs. These DE-miRNAs were linked to 7539 target genes with GO. Also, KEGG analyses demonstrated that these genes were enriched for phosphorylation, VEGF signaling pathway, and MAPK signaling pathway. Additionally, the consistency rate between the qRT-PCR and sequencing results was 83.33%, which showed a high relative reliability of the sequencing results. CONCLUSION: These findings suggest that these 28 exosomal miRNAs may be involved in the regulation of acute soft tissue injury, by one of critical biological processes (BP), phosphorylation. The findings provide valuable clues by utilizing exosomes as therapeutic targets for the effective treatment of acute soft tissue injury. |
format | Online Article Text |
id | pubmed-8405084 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Royan Institute |
record_format | MEDLINE/PubMed |
spelling | pubmed-84050842021-09-04 Circulating Exosomal MicroRNA Profiles Associated with Acute Soft Tissue Injury Yang, Hongchang Zhou, Jing Wang, Junlei Zhang, Luoning Liu, Quzhi Luo, Jing Jia, Hongyan Liu, Li Zhou, Qiang Cell J Original Article OBJECTIVE: This study aimed to characterize the circulating exosomal microRNA (miRNA) profiles associated with acute soft tissue injury. MATERIALS AND METHODS: In this experimental study, a total of 12 rats were randomly divided into control group and model group (n=6 for each group). The rats in the model group were used to establish an acute soft tissue injury following the mechanical injury of the leg. The exosomes from the peripheral blood of all the rats were isolated and then characterized by Nanosight NS300 particle size analyser (NTA), transmission electron microscopy (TEM) and western blot. Next, the exosomal miRNAs in the control and model groups were sequenced, and the differentially expressed miRNAs (DE-miRNAs) were identified using the DESeq algorithm. Functional analyses were performed using Gene Ontology (GO) terms and the Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway databases. Finally, quantitative reverse-transcription polymersa chain reaction (qRT-PCR) was used to verify the expression of the DE-miRNAs. RESULTS: TEM, NTA and western blot results showed that the exosomes were approximately 100 nm in size and exhibited cup-shaped morphology. A total of 628 miRNAs were obtained by sequencing. After that, 28 DE miRNAs (DE- miRNAs) were identified, including seven down-regulated miRNAs and 21 up-regulated miRNAs. These DE-miRNAs were linked to 7539 target genes with GO. Also, KEGG analyses demonstrated that these genes were enriched for phosphorylation, VEGF signaling pathway, and MAPK signaling pathway. Additionally, the consistency rate between the qRT-PCR and sequencing results was 83.33%, which showed a high relative reliability of the sequencing results. CONCLUSION: These findings suggest that these 28 exosomal miRNAs may be involved in the regulation of acute soft tissue injury, by one of critical biological processes (BP), phosphorylation. The findings provide valuable clues by utilizing exosomes as therapeutic targets for the effective treatment of acute soft tissue injury. Royan Institute 2021-09 2021-08-29 /pmc/articles/PMC8405084/ /pubmed/34455724 http://dx.doi.org/10.22074/cellj.2021.7275 Text en The Cell Journal (Yakhteh) is an open access journal which means the articles are freely available online for any individual author to download and use the providing address. The journal is licensed under a Creative Commons Attribution-Non Commercial 3.0 Unported License which allows the author(s) to hold the copyright without restrictions that is permitting unrestricted use, distribution, and reproduction in any medium provided the original work is properly cited. https://creativecommons.org/licenses/by/3.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Yang, Hongchang Zhou, Jing Wang, Junlei Zhang, Luoning Liu, Quzhi Luo, Jing Jia, Hongyan Liu, Li Zhou, Qiang Circulating Exosomal MicroRNA Profiles Associated with Acute Soft Tissue Injury |
title | Circulating Exosomal MicroRNA Profiles Associated with
Acute Soft Tissue Injury |
title_full | Circulating Exosomal MicroRNA Profiles Associated with
Acute Soft Tissue Injury |
title_fullStr | Circulating Exosomal MicroRNA Profiles Associated with
Acute Soft Tissue Injury |
title_full_unstemmed | Circulating Exosomal MicroRNA Profiles Associated with
Acute Soft Tissue Injury |
title_short | Circulating Exosomal MicroRNA Profiles Associated with
Acute Soft Tissue Injury |
title_sort | circulating exosomal microrna profiles associated with
acute soft tissue injury |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405084/ https://www.ncbi.nlm.nih.gov/pubmed/34455724 http://dx.doi.org/10.22074/cellj.2021.7275 |
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