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Complete chloroplast genome sequences of the medicinal plant Piper hancei

Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-...

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Autores principales: Zhang, Lvshui, Hu, Xiaokang, Liu, Mu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405093/
https://www.ncbi.nlm.nih.gov/pubmed/34471701
http://dx.doi.org/10.1080/23802359.2021.1967217
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author Zhang, Lvshui
Hu, Xiaokang
Liu, Mu
author_facet Zhang, Lvshui
Hu, Xiaokang
Liu, Mu
author_sort Zhang, Lvshui
collection PubMed
description Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-copy region of 89,144 bp and a small single-copy region of 18,216 bp. It contained 113 different genes, including 79 protein-coding genes, 30 transfer RNA (tRNA), and four ribosomal RNA genes. Moreover, we also identified 82 SSRs. The phylogenetic inference based on the whole chloroplast genome of 20 taxa showed P. hancei was sister to P. kadsura.
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spelling pubmed-84050932021-08-31 Complete chloroplast genome sequences of the medicinal plant Piper hancei Zhang, Lvshui Hu, Xiaokang Liu, Mu Mitochondrial DNA B Resour Mitogenome Announcement Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-copy region of 89,144 bp and a small single-copy region of 18,216 bp. It contained 113 different genes, including 79 protein-coding genes, 30 transfer RNA (tRNA), and four ribosomal RNA genes. Moreover, we also identified 82 SSRs. The phylogenetic inference based on the whole chloroplast genome of 20 taxa showed P. hancei was sister to P. kadsura. Taylor & Francis 2021-08-27 /pmc/articles/PMC8405093/ /pubmed/34471701 http://dx.doi.org/10.1080/23802359.2021.1967217 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Zhang, Lvshui
Hu, Xiaokang
Liu, Mu
Complete chloroplast genome sequences of the medicinal plant Piper hancei
title Complete chloroplast genome sequences of the medicinal plant Piper hancei
title_full Complete chloroplast genome sequences of the medicinal plant Piper hancei
title_fullStr Complete chloroplast genome sequences of the medicinal plant Piper hancei
title_full_unstemmed Complete chloroplast genome sequences of the medicinal plant Piper hancei
title_short Complete chloroplast genome sequences of the medicinal plant Piper hancei
title_sort complete chloroplast genome sequences of the medicinal plant piper hancei
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405093/
https://www.ncbi.nlm.nih.gov/pubmed/34471701
http://dx.doi.org/10.1080/23802359.2021.1967217
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