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Complete chloroplast genome sequences of the medicinal plant Piper hancei
Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Taylor & Francis
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405093/ https://www.ncbi.nlm.nih.gov/pubmed/34471701 http://dx.doi.org/10.1080/23802359.2021.1967217 |
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author | Zhang, Lvshui Hu, Xiaokang Liu, Mu |
author_facet | Zhang, Lvshui Hu, Xiaokang Liu, Mu |
author_sort | Zhang, Lvshui |
collection | PubMed |
description | Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-copy region of 89,144 bp and a small single-copy region of 18,216 bp. It contained 113 different genes, including 79 protein-coding genes, 30 transfer RNA (tRNA), and four ribosomal RNA genes. Moreover, we also identified 82 SSRs. The phylogenetic inference based on the whole chloroplast genome of 20 taxa showed P. hancei was sister to P. kadsura. |
format | Online Article Text |
id | pubmed-8405093 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-84050932021-08-31 Complete chloroplast genome sequences of the medicinal plant Piper hancei Zhang, Lvshui Hu, Xiaokang Liu, Mu Mitochondrial DNA B Resour Mitogenome Announcement Chloroplast genome sequences have been used in phylogenetic and population genetics studies. Here, we assembled the chloroplast genome of Piper hancei Maxim. that is a traditional Chinese medicine. The genome length was 161,476 bp and included a pair of inverted repeats of 27,058 bp, a large single-copy region of 89,144 bp and a small single-copy region of 18,216 bp. It contained 113 different genes, including 79 protein-coding genes, 30 transfer RNA (tRNA), and four ribosomal RNA genes. Moreover, we also identified 82 SSRs. The phylogenetic inference based on the whole chloroplast genome of 20 taxa showed P. hancei was sister to P. kadsura. Taylor & Francis 2021-08-27 /pmc/articles/PMC8405093/ /pubmed/34471701 http://dx.doi.org/10.1080/23802359.2021.1967217 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Zhang, Lvshui Hu, Xiaokang Liu, Mu Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title | Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title_full | Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title_fullStr | Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title_full_unstemmed | Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title_short | Complete chloroplast genome sequences of the medicinal plant Piper hancei |
title_sort | complete chloroplast genome sequences of the medicinal plant piper hancei |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8405093/ https://www.ncbi.nlm.nih.gov/pubmed/34471701 http://dx.doi.org/10.1080/23802359.2021.1967217 |
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