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Biochemical Barriers on the Path to Ocean Anoxia?

The kinetics of microbial respiration suggests that, if excess organic matter is present, oxygen should fall to nanomolar levels in the range of the Michaelis-Menten constants (K(m)). Yet even in many biologically productive coastal regions, lowest observed O(2) concentrations often remain several o...

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Detalles Bibliográficos
Autores principales: Giovannoni, Stephen, Chan, Francis, Davis, Edward, Deutsch, Curtis, Wolf, Sarah
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8406191/
https://www.ncbi.nlm.nih.gov/pubmed/34253057
http://dx.doi.org/10.1128/mBio.01332-21
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author Giovannoni, Stephen
Chan, Francis
Davis, Edward
Deutsch, Curtis
Wolf, Sarah
author_facet Giovannoni, Stephen
Chan, Francis
Davis, Edward
Deutsch, Curtis
Wolf, Sarah
author_sort Giovannoni, Stephen
collection PubMed
description The kinetics of microbial respiration suggests that, if excess organic matter is present, oxygen should fall to nanomolar levels in the range of the Michaelis-Menten constants (K(m)). Yet even in many biologically productive coastal regions, lowest observed O(2) concentrations often remain several orders of magnitude higher than respiratory K(m) values. We propose the hypoxic barrier hypothesis (HBH) to explain this apparent discrepancy. The HBH postulates that oxidative enzymes involved in organic matter catabolism are kinetically limited by O(2) at concentrations far higher than the thresholds for respiration. We found support for the HBH in a meta-analysis of 1,137 O(2) K(m) values reported in the literature: the median value for terminal respiratory oxidases was 350 nM, but for other oxidase types, the median value was 67 μM. The HBH directs our attention to the kinetic properties of an important class of oxygen-dependent reactions that could help explain the trajectories of ocean ecosystems experiencing O(2) stress.
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spelling pubmed-84061912021-09-09 Biochemical Barriers on the Path to Ocean Anoxia? Giovannoni, Stephen Chan, Francis Davis, Edward Deutsch, Curtis Wolf, Sarah mBio Research Article The kinetics of microbial respiration suggests that, if excess organic matter is present, oxygen should fall to nanomolar levels in the range of the Michaelis-Menten constants (K(m)). Yet even in many biologically productive coastal regions, lowest observed O(2) concentrations often remain several orders of magnitude higher than respiratory K(m) values. We propose the hypoxic barrier hypothesis (HBH) to explain this apparent discrepancy. The HBH postulates that oxidative enzymes involved in organic matter catabolism are kinetically limited by O(2) at concentrations far higher than the thresholds for respiration. We found support for the HBH in a meta-analysis of 1,137 O(2) K(m) values reported in the literature: the median value for terminal respiratory oxidases was 350 nM, but for other oxidase types, the median value was 67 μM. The HBH directs our attention to the kinetic properties of an important class of oxygen-dependent reactions that could help explain the trajectories of ocean ecosystems experiencing O(2) stress. American Society for Microbiology 2021-07-13 /pmc/articles/PMC8406191/ /pubmed/34253057 http://dx.doi.org/10.1128/mBio.01332-21 Text en Copyright © 2021 Giovannoni et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Article
Giovannoni, Stephen
Chan, Francis
Davis, Edward
Deutsch, Curtis
Wolf, Sarah
Biochemical Barriers on the Path to Ocean Anoxia?
title Biochemical Barriers on the Path to Ocean Anoxia?
title_full Biochemical Barriers on the Path to Ocean Anoxia?
title_fullStr Biochemical Barriers on the Path to Ocean Anoxia?
title_full_unstemmed Biochemical Barriers on the Path to Ocean Anoxia?
title_short Biochemical Barriers on the Path to Ocean Anoxia?
title_sort biochemical barriers on the path to ocean anoxia?
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8406191/
https://www.ncbi.nlm.nih.gov/pubmed/34253057
http://dx.doi.org/10.1128/mBio.01332-21
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