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bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the pr...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Oxford University Press
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8407867/ http://dx.doi.org/10.1093/ije/dyab049 |
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author | Henrion, Marc YR |
author_facet | Henrion, Marc YR |
author_sort | Henrion, Marc YR |
collection | PubMed |
description | MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the prevalence of the underlying condition, (iii) adjusting a seroprevalence for test sensitivity and specificity. Calculating combined parameter estimates is generally straightforward, but deriving corresponding confidence intervals often is not. bootComb is an R package using parametric bootstrap sampling to derive such intervals. IMPLEMENTATION: bootComb is a package for the statistical computation environment R. GENERAL FEATURES: Apart from a function returning confidence intervals for parameters combined from several independent estimates, bootComb provides auxiliary functions for 6 common distributions (beta, normal, exponential, gamma, Poisson and negative binomial) to derive best-fit distributions for parameters given their reported confidence intervals. AVAILABILITY: bootComb is available from the Comprehensive R Archive Network (https://CRAN.R-project.org/package=bootComb). |
format | Online Article Text |
id | pubmed-8407867 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-84078672021-09-01 bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates Henrion, Marc YR Int J Epidemiol Software Application Profile MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the prevalence of the underlying condition, (iii) adjusting a seroprevalence for test sensitivity and specificity. Calculating combined parameter estimates is generally straightforward, but deriving corresponding confidence intervals often is not. bootComb is an R package using parametric bootstrap sampling to derive such intervals. IMPLEMENTATION: bootComb is a package for the statistical computation environment R. GENERAL FEATURES: Apart from a function returning confidence intervals for parameters combined from several independent estimates, bootComb provides auxiliary functions for 6 common distributions (beta, normal, exponential, gamma, Poisson and negative binomial) to derive best-fit distributions for parameters given their reported confidence intervals. AVAILABILITY: bootComb is available from the Comprehensive R Archive Network (https://CRAN.R-project.org/package=bootComb). Oxford University Press 2021-05-19 /pmc/articles/PMC8407867/ http://dx.doi.org/10.1093/ije/dyab049 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the International Epidemiological Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Software Application Profile Henrion, Marc YR bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title | bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title_full | bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title_fullStr | bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title_full_unstemmed | bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title_short | bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates |
title_sort | bootcomb—an r package to derive confidence intervals for combinations of independent parameter estimates |
topic | Software Application Profile |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8407867/ http://dx.doi.org/10.1093/ije/dyab049 |
work_keys_str_mv | AT henrionmarcyr bootcombanrpackagetoderiveconfidenceintervalsforcombinationsofindependentparameterestimates |