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bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates

MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the pr...

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Autor principal: Henrion, Marc YR
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8407867/
http://dx.doi.org/10.1093/ije/dyab049
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author Henrion, Marc YR
author_facet Henrion, Marc YR
author_sort Henrion, Marc YR
collection PubMed
description MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the prevalence of the underlying condition, (iii) adjusting a seroprevalence for test sensitivity and specificity. Calculating combined parameter estimates is generally straightforward, but deriving corresponding confidence intervals often is not. bootComb is an R package using parametric bootstrap sampling to derive such intervals. IMPLEMENTATION: bootComb is a package for the statistical computation environment R. GENERAL FEATURES: Apart from a function returning confidence intervals for parameters combined from several independent estimates, bootComb provides auxiliary functions for 6 common distributions (beta, normal, exponential, gamma, Poisson and negative binomial) to derive best-fit distributions for parameters given their reported confidence intervals. AVAILABILITY: bootComb is available from the Comprehensive R Archive Network (https://CRAN.R-project.org/package=bootComb).
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spelling pubmed-84078672021-09-01 bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates Henrion, Marc YR Int J Epidemiol Software Application Profile MOTIVATION: To address the limits of facility- or study-based estimates, multiple independent parameter estimates may need to be combined. Specific examples include (i) adjusting an incidence rate for healthcare utilisation, (ii) deriving a disease prevalence from a conditional prevalence and the prevalence of the underlying condition, (iii) adjusting a seroprevalence for test sensitivity and specificity. Calculating combined parameter estimates is generally straightforward, but deriving corresponding confidence intervals often is not. bootComb is an R package using parametric bootstrap sampling to derive such intervals. IMPLEMENTATION: bootComb is a package for the statistical computation environment R. GENERAL FEATURES: Apart from a function returning confidence intervals for parameters combined from several independent estimates, bootComb provides auxiliary functions for 6 common distributions (beta, normal, exponential, gamma, Poisson and negative binomial) to derive best-fit distributions for parameters given their reported confidence intervals. AVAILABILITY: bootComb is available from the Comprehensive R Archive Network (https://CRAN.R-project.org/package=bootComb). Oxford University Press 2021-05-19 /pmc/articles/PMC8407867/ http://dx.doi.org/10.1093/ije/dyab049 Text en © The Author(s) 2021. Published by Oxford University Press on behalf of the International Epidemiological Association. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Software Application Profile
Henrion, Marc YR
bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title_full bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title_fullStr bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title_full_unstemmed bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title_short bootComb—an R package to derive confidence intervals for combinations of independent parameter estimates
title_sort bootcomb—an r package to derive confidence intervals for combinations of independent parameter estimates
topic Software Application Profile
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8407867/
http://dx.doi.org/10.1093/ije/dyab049
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