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Application of alternative de novo motif recognition models for analysis of structural heterogeneity of transcription factor binding sites: a case study of FOXA2 binding sites

The most popular model for the search of ChIP-seq data for transcription factor binding sites (TFBS) is the positional weight matrix (PWM). However, this model does not take into account dependencies between nucleotide occurrences in different site positions. Currently, two recently proposed models,...

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Detalles Bibliográficos
Autores principales:	Tsukanov, A.V., Levitsky, V.G., Merkulova, T.I.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	The Federal Research Center Institute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences 2021
Materias:	/ Original article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8408018/ https://www.ncbi.nlm.nih.gov/pubmed/34547062 http://dx.doi.org/10.18699/VJ21.002

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