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Identification of pollen taxa by different microscopy techniques

Melissopalynology is an important analytical method to identify botanical origin of honey. Pollen grain recognition is commonly performed by visual inspection by a trained person. An alternative method for visual inspection is automated pollen analysis based on the image analysis technique. Image an...

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Autores principales: Pospiech, Matej, Javůrková, Zdeňka, Hrabec, Pavel, Štarha, Pavel, Ljasovská, Simona, Bednář, Josef, Tremlová, Bohuslava
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8409677/
https://www.ncbi.nlm.nih.gov/pubmed/34469471
http://dx.doi.org/10.1371/journal.pone.0256808
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author Pospiech, Matej
Javůrková, Zdeňka
Hrabec, Pavel
Štarha, Pavel
Ljasovská, Simona
Bednář, Josef
Tremlová, Bohuslava
author_facet Pospiech, Matej
Javůrková, Zdeňka
Hrabec, Pavel
Štarha, Pavel
Ljasovská, Simona
Bednář, Josef
Tremlová, Bohuslava
author_sort Pospiech, Matej
collection PubMed
description Melissopalynology is an important analytical method to identify botanical origin of honey. Pollen grain recognition is commonly performed by visual inspection by a trained person. An alternative method for visual inspection is automated pollen analysis based on the image analysis technique. Image analysis transfers visual information to mathematical descriptions. In this work, the suitability of three microscopic techniques for automatic analysis of pollen grains was studied. 2D and 3D morphological characteristics, textural and colour features, and extended depth of focus characteristics were used for the pollen discrimination. In this study, 7 botanical taxa and a total of 2482 pollen grains were evaluated. The highest correct classification rate of 93.05% was achieved using the phase contrast microscopy, followed by the dark field microscopy reaching 91.02%, and finally by the light field microscopy reaching 88.88%. The most significant discriminant characteristics were morphological (2D and 3D) and colour characteristics. Our results confirm the potential of using automatic pollen analysis to discriminate pollen taxa in honey. This work provides the basis for further research where the taxa dataset will be increased, and new descriptors will be studied.
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spelling pubmed-84096772021-09-02 Identification of pollen taxa by different microscopy techniques Pospiech, Matej Javůrková, Zdeňka Hrabec, Pavel Štarha, Pavel Ljasovská, Simona Bednář, Josef Tremlová, Bohuslava PLoS One Research Article Melissopalynology is an important analytical method to identify botanical origin of honey. Pollen grain recognition is commonly performed by visual inspection by a trained person. An alternative method for visual inspection is automated pollen analysis based on the image analysis technique. Image analysis transfers visual information to mathematical descriptions. In this work, the suitability of three microscopic techniques for automatic analysis of pollen grains was studied. 2D and 3D morphological characteristics, textural and colour features, and extended depth of focus characteristics were used for the pollen discrimination. In this study, 7 botanical taxa and a total of 2482 pollen grains were evaluated. The highest correct classification rate of 93.05% was achieved using the phase contrast microscopy, followed by the dark field microscopy reaching 91.02%, and finally by the light field microscopy reaching 88.88%. The most significant discriminant characteristics were morphological (2D and 3D) and colour characteristics. Our results confirm the potential of using automatic pollen analysis to discriminate pollen taxa in honey. This work provides the basis for further research where the taxa dataset will be increased, and new descriptors will be studied. Public Library of Science 2021-09-01 /pmc/articles/PMC8409677/ /pubmed/34469471 http://dx.doi.org/10.1371/journal.pone.0256808 Text en © 2021 Pospiech et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Pospiech, Matej
Javůrková, Zdeňka
Hrabec, Pavel
Štarha, Pavel
Ljasovská, Simona
Bednář, Josef
Tremlová, Bohuslava
Identification of pollen taxa by different microscopy techniques
title Identification of pollen taxa by different microscopy techniques
title_full Identification of pollen taxa by different microscopy techniques
title_fullStr Identification of pollen taxa by different microscopy techniques
title_full_unstemmed Identification of pollen taxa by different microscopy techniques
title_short Identification of pollen taxa by different microscopy techniques
title_sort identification of pollen taxa by different microscopy techniques
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8409677/
https://www.ncbi.nlm.nih.gov/pubmed/34469471
http://dx.doi.org/10.1371/journal.pone.0256808
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