Cargando…

Forming Consensus To Advance Urobiome Research

Urobiome research has the potential to advance the understanding of a wide range of diseases, including lower urinary tract symptoms and kidney disease. Many scientific areas have benefited from early research method consensus to facilitate the greater, common good. This consensus document, develope...

Descripción completa

Detalles Bibliográficos
Autores principales: Brubaker, Linda, Gourdine, Jean-Philippe F., Siddiqui, Nazema Y., Holland, Amanda, Halverson, Thomas, Limeria, Roberto, Pride, David, Ackerman, Lenore, Forster, Catherine S., Jacobs, Kristin M., Thomas-White, Krystal J., Putonti, Catherine, Dong, Qunfeng, Weinstein, Michael, Lukacz, Emily S., Karstens, Lisa, Wolfe, Alan J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8409733/
https://www.ncbi.nlm.nih.gov/pubmed/34282932
http://dx.doi.org/10.1128/mSystems.01371-20
_version_ 1783747043424993280
author Brubaker, Linda
Gourdine, Jean-Philippe F.
Siddiqui, Nazema Y.
Holland, Amanda
Halverson, Thomas
Limeria, Roberto
Pride, David
Ackerman, Lenore
Forster, Catherine S.
Jacobs, Kristin M.
Thomas-White, Krystal J.
Putonti, Catherine
Dong, Qunfeng
Weinstein, Michael
Lukacz, Emily S.
Karstens, Lisa
Wolfe, Alan J.
author_facet Brubaker, Linda
Gourdine, Jean-Philippe F.
Siddiqui, Nazema Y.
Holland, Amanda
Halverson, Thomas
Limeria, Roberto
Pride, David
Ackerman, Lenore
Forster, Catherine S.
Jacobs, Kristin M.
Thomas-White, Krystal J.
Putonti, Catherine
Dong, Qunfeng
Weinstein, Michael
Lukacz, Emily S.
Karstens, Lisa
Wolfe, Alan J.
author_sort Brubaker, Linda
collection PubMed
description Urobiome research has the potential to advance the understanding of a wide range of diseases, including lower urinary tract symptoms and kidney disease. Many scientific areas have benefited from early research method consensus to facilitate the greater, common good. This consensus document, developed by a group of expert investigators currently engaged in urobiome research (UROBIOME 2020 conference participants), aims to promote standardization and advances in this field by the adoption of common core research practices. We propose a standardized nomenclature as well as considerations for specimen collection, preservation, storage, and processing. Best practices for urobiome study design include our proposal for standard metadata elements as part of core metadata collection. Although it is impractical to follow fixed analytical procedures when analyzing urobiome data, we propose guidelines to document and report data originating from urobiome studies. We offer this first consensus document with every expectation of subsequent revision as our field progresses.
format Online
Article
Text
id pubmed-8409733
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-84097332021-09-09 Forming Consensus To Advance Urobiome Research Brubaker, Linda Gourdine, Jean-Philippe F. Siddiqui, Nazema Y. Holland, Amanda Halverson, Thomas Limeria, Roberto Pride, David Ackerman, Lenore Forster, Catherine S. Jacobs, Kristin M. Thomas-White, Krystal J. Putonti, Catherine Dong, Qunfeng Weinstein, Michael Lukacz, Emily S. Karstens, Lisa Wolfe, Alan J. mSystems Opinion/Hypothesis Urobiome research has the potential to advance the understanding of a wide range of diseases, including lower urinary tract symptoms and kidney disease. Many scientific areas have benefited from early research method consensus to facilitate the greater, common good. This consensus document, developed by a group of expert investigators currently engaged in urobiome research (UROBIOME 2020 conference participants), aims to promote standardization and advances in this field by the adoption of common core research practices. We propose a standardized nomenclature as well as considerations for specimen collection, preservation, storage, and processing. Best practices for urobiome study design include our proposal for standard metadata elements as part of core metadata collection. Although it is impractical to follow fixed analytical procedures when analyzing urobiome data, we propose guidelines to document and report data originating from urobiome studies. We offer this first consensus document with every expectation of subsequent revision as our field progresses. American Society for Microbiology 2021-07-20 /pmc/articles/PMC8409733/ /pubmed/34282932 http://dx.doi.org/10.1128/mSystems.01371-20 Text en Copyright © 2021 Brubaker et al. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Opinion/Hypothesis
Brubaker, Linda
Gourdine, Jean-Philippe F.
Siddiqui, Nazema Y.
Holland, Amanda
Halverson, Thomas
Limeria, Roberto
Pride, David
Ackerman, Lenore
Forster, Catherine S.
Jacobs, Kristin M.
Thomas-White, Krystal J.
Putonti, Catherine
Dong, Qunfeng
Weinstein, Michael
Lukacz, Emily S.
Karstens, Lisa
Wolfe, Alan J.
Forming Consensus To Advance Urobiome Research
title Forming Consensus To Advance Urobiome Research
title_full Forming Consensus To Advance Urobiome Research
title_fullStr Forming Consensus To Advance Urobiome Research
title_full_unstemmed Forming Consensus To Advance Urobiome Research
title_short Forming Consensus To Advance Urobiome Research
title_sort forming consensus to advance urobiome research
topic Opinion/Hypothesis
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8409733/
https://www.ncbi.nlm.nih.gov/pubmed/34282932
http://dx.doi.org/10.1128/mSystems.01371-20
work_keys_str_mv AT brubakerlinda formingconsensustoadvanceurobiomeresearch
AT gourdinejeanphilippef formingconsensustoadvanceurobiomeresearch
AT siddiquinazemay formingconsensustoadvanceurobiomeresearch
AT hollandamanda formingconsensustoadvanceurobiomeresearch
AT halversonthomas formingconsensustoadvanceurobiomeresearch
AT limeriaroberto formingconsensustoadvanceurobiomeresearch
AT pridedavid formingconsensustoadvanceurobiomeresearch
AT ackermanlenore formingconsensustoadvanceurobiomeresearch
AT forstercatherines formingconsensustoadvanceurobiomeresearch
AT jacobskristinm formingconsensustoadvanceurobiomeresearch
AT thomaswhitekrystalj formingconsensustoadvanceurobiomeresearch
AT putonticatherine formingconsensustoadvanceurobiomeresearch
AT dongqunfeng formingconsensustoadvanceurobiomeresearch
AT weinsteinmichael formingconsensustoadvanceurobiomeresearch
AT lukaczemilys formingconsensustoadvanceurobiomeresearch
AT karstenslisa formingconsensustoadvanceurobiomeresearch
AT wolfealanj formingconsensustoadvanceurobiomeresearch