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Clinical Exome Reanalysis: Current Practice and Beyond

Novel gene-disease discoveries, rapid advancements in technology, and improved bioinformatics tools all have the potential to yield additional molecular diagnoses through the reanalysis of exome sequencing data. Collaborations between clinical laboratories, ordering physicians, and researchers are a...

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Autores principales: Ji, Jianling, Leung, Marco L., Baker, Samuel, Deignan, Joshua L., Santani, Avni
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410709/
https://www.ncbi.nlm.nih.gov/pubmed/34283395
http://dx.doi.org/10.1007/s40291-021-00541-7
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author Ji, Jianling
Leung, Marco L.
Baker, Samuel
Deignan, Joshua L.
Santani, Avni
author_facet Ji, Jianling
Leung, Marco L.
Baker, Samuel
Deignan, Joshua L.
Santani, Avni
author_sort Ji, Jianling
collection PubMed
description Novel gene-disease discoveries, rapid advancements in technology, and improved bioinformatics tools all have the potential to yield additional molecular diagnoses through the reanalysis of exome sequencing data. Collaborations between clinical laboratories, ordering physicians, and researchers are also driving factors that can contribute to these new insights. Automation in ongoing natural history collection, evolving phenotype updates, advancements in processing next-generation sequencing data, and up-to-date variant-gene-disease databases are increasingly needed for systematic exome reanalysis. Here, we review some of the advantages and challenges for clinician-initiated and laboratory-initiated exome reanalysis, and we propose a model for the future that could potentially maximize the clinical utility of exome reanalysis by integrating information from electronic medical records and knowledge databases into routine clinical workflows.
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spelling pubmed-84107092021-09-22 Clinical Exome Reanalysis: Current Practice and Beyond Ji, Jianling Leung, Marco L. Baker, Samuel Deignan, Joshua L. Santani, Avni Mol Diagn Ther Current Opinion Novel gene-disease discoveries, rapid advancements in technology, and improved bioinformatics tools all have the potential to yield additional molecular diagnoses through the reanalysis of exome sequencing data. Collaborations between clinical laboratories, ordering physicians, and researchers are also driving factors that can contribute to these new insights. Automation in ongoing natural history collection, evolving phenotype updates, advancements in processing next-generation sequencing data, and up-to-date variant-gene-disease databases are increasingly needed for systematic exome reanalysis. Here, we review some of the advantages and challenges for clinician-initiated and laboratory-initiated exome reanalysis, and we propose a model for the future that could potentially maximize the clinical utility of exome reanalysis by integrating information from electronic medical records and knowledge databases into routine clinical workflows. Springer International Publishing 2021-07-20 2021 /pmc/articles/PMC8410709/ /pubmed/34283395 http://dx.doi.org/10.1007/s40291-021-00541-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by-nc/4.0/Open AccessThis article is licensed under a Creative Commons Attribution-NonCommercial 4.0 International License, which permits any non-commercial use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) .
spellingShingle Current Opinion
Ji, Jianling
Leung, Marco L.
Baker, Samuel
Deignan, Joshua L.
Santani, Avni
Clinical Exome Reanalysis: Current Practice and Beyond
title Clinical Exome Reanalysis: Current Practice and Beyond
title_full Clinical Exome Reanalysis: Current Practice and Beyond
title_fullStr Clinical Exome Reanalysis: Current Practice and Beyond
title_full_unstemmed Clinical Exome Reanalysis: Current Practice and Beyond
title_short Clinical Exome Reanalysis: Current Practice and Beyond
title_sort clinical exome reanalysis: current practice and beyond
topic Current Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410709/
https://www.ncbi.nlm.nih.gov/pubmed/34283395
http://dx.doi.org/10.1007/s40291-021-00541-7
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