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Wavelet geographically weighted regression for spectroscopic modelling of soil properties

Soil properties, such as organic carbon, pH and clay content, are critical indicators of ecosystem function. Visible–near infrared (vis–NIR) reflectance spectroscopy has been widely used to cost-efficiently estimate such soil properties. Multivariate modelling, such as partial least squares regressi...

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Autores principales: Song, Yongze, Shen, Zefang, Wu, Peng, Viscarra Rossel, R. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410793/
https://www.ncbi.nlm.nih.gov/pubmed/34471173
http://dx.doi.org/10.1038/s41598-021-96772-z
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author Song, Yongze
Shen, Zefang
Wu, Peng
Viscarra Rossel, R. A.
author_facet Song, Yongze
Shen, Zefang
Wu, Peng
Viscarra Rossel, R. A.
author_sort Song, Yongze
collection PubMed
description Soil properties, such as organic carbon, pH and clay content, are critical indicators of ecosystem function. Visible–near infrared (vis–NIR) reflectance spectroscopy has been widely used to cost-efficiently estimate such soil properties. Multivariate modelling, such as partial least squares regression (PLSR), and machine learning are the most common methods for modelling soil properties with spectra. Often, such models do not account for the multiresolution information presented in the vis–NIR signal, or the spatial variation in the data. To address these potential shortcomings, we used wavelets to decompose the vis–NIR spectra of 226 soils from agricultural and forested regions in south-western Western Australia and developed a wavelet geographically weighted regression (WGWR) for estimating soil organic carbon content, clay content and pH. To evaluate the WGWR models, we compared them to linear models derived with multiresolution data from a wavelet decomposition (WLR) and PLSR without multiresolution information. Overall, validation of the WGWR models produced more accurate estimates of the soil properties than WLR and PLSR. Around 3.5–49.1% of the improvement in the estimates was due to the multiresolution analysis and 1.0–5.2% due to the integration of spatial information in the modelling. The WGWR improves the modelling of soil properties with spectra.
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spelling pubmed-84107932021-09-03 Wavelet geographically weighted regression for spectroscopic modelling of soil properties Song, Yongze Shen, Zefang Wu, Peng Viscarra Rossel, R. A. Sci Rep Article Soil properties, such as organic carbon, pH and clay content, are critical indicators of ecosystem function. Visible–near infrared (vis–NIR) reflectance spectroscopy has been widely used to cost-efficiently estimate such soil properties. Multivariate modelling, such as partial least squares regression (PLSR), and machine learning are the most common methods for modelling soil properties with spectra. Often, such models do not account for the multiresolution information presented in the vis–NIR signal, or the spatial variation in the data. To address these potential shortcomings, we used wavelets to decompose the vis–NIR spectra of 226 soils from agricultural and forested regions in south-western Western Australia and developed a wavelet geographically weighted regression (WGWR) for estimating soil organic carbon content, clay content and pH. To evaluate the WGWR models, we compared them to linear models derived with multiresolution data from a wavelet decomposition (WLR) and PLSR without multiresolution information. Overall, validation of the WGWR models produced more accurate estimates of the soil properties than WLR and PLSR. Around 3.5–49.1% of the improvement in the estimates was due to the multiresolution analysis and 1.0–5.2% due to the integration of spatial information in the modelling. The WGWR improves the modelling of soil properties with spectra. Nature Publishing Group UK 2021-09-01 /pmc/articles/PMC8410793/ /pubmed/34471173 http://dx.doi.org/10.1038/s41598-021-96772-z Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Song, Yongze
Shen, Zefang
Wu, Peng
Viscarra Rossel, R. A.
Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title_full Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title_fullStr Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title_full_unstemmed Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title_short Wavelet geographically weighted regression for spectroscopic modelling of soil properties
title_sort wavelet geographically weighted regression for spectroscopic modelling of soil properties
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410793/
https://www.ncbi.nlm.nih.gov/pubmed/34471173
http://dx.doi.org/10.1038/s41598-021-96772-z
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