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A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes

Lignin has significant potential as an abundant and renewable source for commodity chemicals yet remains vastly underutilized. Efforts towards engineering a biochemical route to the valorization of lignin are currently limited by the lack of a suitable heterologous host for the production of lignin-...

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Autores principales: Khlystov, Nikita A., Yoshikuni, Yasuo, Deutsch, Samuel, Sattely, Elizabeth S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410833/
https://www.ncbi.nlm.nih.gov/pubmed/34471192
http://dx.doi.org/10.1038/s42003-021-02464-9
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author Khlystov, Nikita A.
Yoshikuni, Yasuo
Deutsch, Samuel
Sattely, Elizabeth S.
author_facet Khlystov, Nikita A.
Yoshikuni, Yasuo
Deutsch, Samuel
Sattely, Elizabeth S.
author_sort Khlystov, Nikita A.
collection PubMed
description Lignin has significant potential as an abundant and renewable source for commodity chemicals yet remains vastly underutilized. Efforts towards engineering a biochemical route to the valorization of lignin are currently limited by the lack of a suitable heterologous host for the production of lignin-degrading enzymes. Here, we show that expression of fungal genes in Nicotiana benthamiana enables production of members from seven major classes of enzymes associated with lignin degradation (23 of 35 tested) in soluble form for direct use in lignin activity assays. We combinatorially characterized a subset of these enzymes in the context of model lignin dimer oxidation, revealing that fine-tuned coupling of peroxide-generators to peroxidases results in more extensive C-C bond cleavage compared to direct addition of peroxide. Comparison of peroxidase isoform activity revealed that the extent of C-C bond cleavage depends on peroxidase identity, suggesting that peroxidases are individually specialized in the context of lignin oxidation. We anticipate the use of N. benthamiana as a platform to rapidly produce a diverse array of fungal lignin-degrading enzymes will facilitate a better understanding of their concerted role in nature and unlock their potential for lignin valorization, including within the plant host itself.
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spelling pubmed-84108332021-09-22 A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes Khlystov, Nikita A. Yoshikuni, Yasuo Deutsch, Samuel Sattely, Elizabeth S. Commun Biol Article Lignin has significant potential as an abundant and renewable source for commodity chemicals yet remains vastly underutilized. Efforts towards engineering a biochemical route to the valorization of lignin are currently limited by the lack of a suitable heterologous host for the production of lignin-degrading enzymes. Here, we show that expression of fungal genes in Nicotiana benthamiana enables production of members from seven major classes of enzymes associated with lignin degradation (23 of 35 tested) in soluble form for direct use in lignin activity assays. We combinatorially characterized a subset of these enzymes in the context of model lignin dimer oxidation, revealing that fine-tuned coupling of peroxide-generators to peroxidases results in more extensive C-C bond cleavage compared to direct addition of peroxide. Comparison of peroxidase isoform activity revealed that the extent of C-C bond cleavage depends on peroxidase identity, suggesting that peroxidases are individually specialized in the context of lignin oxidation. We anticipate the use of N. benthamiana as a platform to rapidly produce a diverse array of fungal lignin-degrading enzymes will facilitate a better understanding of their concerted role in nature and unlock their potential for lignin valorization, including within the plant host itself. Nature Publishing Group UK 2021-09-01 /pmc/articles/PMC8410833/ /pubmed/34471192 http://dx.doi.org/10.1038/s42003-021-02464-9 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Khlystov, Nikita A.
Yoshikuni, Yasuo
Deutsch, Samuel
Sattely, Elizabeth S.
A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title_full A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title_fullStr A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title_full_unstemmed A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title_short A plant host, Nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
title_sort plant host, nicotiana benthamiana, enables the production and study of fungal lignin-degrading enzymes
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8410833/
https://www.ncbi.nlm.nih.gov/pubmed/34471192
http://dx.doi.org/10.1038/s42003-021-02464-9
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