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Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436

The crystal structure of the class D β-lactamase OXA-436 was solved to a resolution of 1.80 Å. Higher catalytic rates were found at higher temperatures for the clinically important antibiotic imipenem, indicating better adaptation of OXA-436 to its mesophilic host than OXA-48, which is believed to o...

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Autores principales: Lund, Bjarte Aarmo, Thomassen, Ane Molden, Carlsen, Trine Josefine Warg, Leiros, Hanna-Kirsti Schrøder
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8411929/
https://www.ncbi.nlm.nih.gov/pubmed/34473108
http://dx.doi.org/10.1107/S2053230X21008645
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author Lund, Bjarte Aarmo
Thomassen, Ane Molden
Carlsen, Trine Josefine Warg
Leiros, Hanna-Kirsti Schrøder
author_facet Lund, Bjarte Aarmo
Thomassen, Ane Molden
Carlsen, Trine Josefine Warg
Leiros, Hanna-Kirsti Schrøder
author_sort Lund, Bjarte Aarmo
collection PubMed
description The crystal structure of the class D β-lactamase OXA-436 was solved to a resolution of 1.80 Å. Higher catalytic rates were found at higher temperatures for the clinically important antibiotic imipenem, indicating better adaptation of OXA-436 to its mesophilic host than OXA-48, which is believed to originate from an environmental source. Furthermore, based on the most populated conformations during 100 ns molecular-dynamics simulations, it is postulated that the modulation of activity involves conformational shifts of the α3–α4 and β5–β6 loops. While these changes overall do not cause clinically significant shifts in the resistance profile, they show that antibiotic-resistance enzymes exist in a continuum. It is believed that these seemingly neutral differences in the sequence exist on a path leading to significant changes in substrate selectivity.
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spelling pubmed-84119292021-09-13 Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436 Lund, Bjarte Aarmo Thomassen, Ane Molden Carlsen, Trine Josefine Warg Leiros, Hanna-Kirsti Schrøder Acta Crystallogr F Struct Biol Commun Research Communications The crystal structure of the class D β-lactamase OXA-436 was solved to a resolution of 1.80 Å. Higher catalytic rates were found at higher temperatures for the clinically important antibiotic imipenem, indicating better adaptation of OXA-436 to its mesophilic host than OXA-48, which is believed to originate from an environmental source. Furthermore, based on the most populated conformations during 100 ns molecular-dynamics simulations, it is postulated that the modulation of activity involves conformational shifts of the α3–α4 and β5–β6 loops. While these changes overall do not cause clinically significant shifts in the resistance profile, they show that antibiotic-resistance enzymes exist in a continuum. It is believed that these seemingly neutral differences in the sequence exist on a path leading to significant changes in substrate selectivity. International Union of Crystallography 2021-08-31 /pmc/articles/PMC8411929/ /pubmed/34473108 http://dx.doi.org/10.1107/S2053230X21008645 Text en © Bjarte Aarmo Lund et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Communications
Lund, Bjarte Aarmo
Thomassen, Ane Molden
Carlsen, Trine Josefine Warg
Leiros, Hanna-Kirsti Schrøder
Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title_full Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title_fullStr Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title_full_unstemmed Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title_short Biochemical and biophysical characterization of the OXA-48-like carbapenemase OXA-436
title_sort biochemical and biophysical characterization of the oxa-48-like carbapenemase oxa-436
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8411929/
https://www.ncbi.nlm.nih.gov/pubmed/34473108
http://dx.doi.org/10.1107/S2053230X21008645
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