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Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching

Background  Higher enrolment rates of cancer patients into clinical trials are necessary to increase cancer survival. As a prerequisite, an improved semiautomated matching of patient characteristics with clinical trial eligibility criteria is needed. This is based on the computer interpretability, i...

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Autores principales: Dieter, Julia, Dominick, Friederike, Knurr, Alexander, Ahlbrandt, Janko, Ückert, Frank
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Georg Thieme Verlag KG 2021
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8412998/
https://www.ncbi.nlm.nih.gov/pubmed/33890270
http://dx.doi.org/10.1055/s-0041-1724107
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author Dieter, Julia
Dominick, Friederike
Knurr, Alexander
Ahlbrandt, Janko
Ückert, Frank
author_facet Dieter, Julia
Dominick, Friederike
Knurr, Alexander
Ahlbrandt, Janko
Ückert, Frank
author_sort Dieter, Julia
collection PubMed
description Background  Higher enrolment rates of cancer patients into clinical trials are necessary to increase cancer survival. As a prerequisite, an improved semiautomated matching of patient characteristics with clinical trial eligibility criteria is needed. This is based on the computer interpretability, i.e., structurability of eligibility criteria texts. To increase structurability, the common content, phrasing, and structuring problems of oncological eligibility criteria need to be better understood. Objectives  We aimed to identify oncological eligibility criteria that were not possible to be structured by our manual approach and categorize them by the underlying structuring problem. Our results shall contribute to improved criteria phrasing in the future as a prerequisite for increased structurability. Methods  The inclusion and exclusion criteria of 159 oncological studies from the Clinical Trial Information System of the National Center for Tumor Diseases Heidelberg were manually structured and grouped into content-related subcategories. Criteria identified as not structurable were analyzed further and manually categorized by the underlying structuring problem. Results  The structuring of criteria resulted in 4,742 smallest meaningful components (SMCs) distributed across seven main categories (Diagnosis, Therapy, Laboratory, Study, Findings, Demographics, and Lifestyle, Others). A proportion of 645 SMCs (13.60%) was not possible to be structured due to content- and structure-related issues. Of these, a subset of 415 SMCs (64.34%) was considered not remediable, as supplementary medical knowledge would have been needed or the linkage among the sentence components was too complex. The main category “Diagnosis and Study” contained these two subcategories to the largest parts and thus were the least structurable. In the inclusion criteria, reasons for lacking structurability varied, while missing supplementary medical knowledge was the largest factor within the exclusion criteria. Conclusion  Our results suggest that further improvement of eligibility criterion phrasing only marginally contributes to increased structurability. Instead, physician-based confirmation of the matching results and the exclusion of factors harming the patient or biasing the study is needed.
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spelling pubmed-84129982021-09-07 Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching Dieter, Julia Dominick, Friederike Knurr, Alexander Ahlbrandt, Janko Ückert, Frank Methods Inf Med Background  Higher enrolment rates of cancer patients into clinical trials are necessary to increase cancer survival. As a prerequisite, an improved semiautomated matching of patient characteristics with clinical trial eligibility criteria is needed. This is based on the computer interpretability, i.e., structurability of eligibility criteria texts. To increase structurability, the common content, phrasing, and structuring problems of oncological eligibility criteria need to be better understood. Objectives  We aimed to identify oncological eligibility criteria that were not possible to be structured by our manual approach and categorize them by the underlying structuring problem. Our results shall contribute to improved criteria phrasing in the future as a prerequisite for increased structurability. Methods  The inclusion and exclusion criteria of 159 oncological studies from the Clinical Trial Information System of the National Center for Tumor Diseases Heidelberg were manually structured and grouped into content-related subcategories. Criteria identified as not structurable were analyzed further and manually categorized by the underlying structuring problem. Results  The structuring of criteria resulted in 4,742 smallest meaningful components (SMCs) distributed across seven main categories (Diagnosis, Therapy, Laboratory, Study, Findings, Demographics, and Lifestyle, Others). A proportion of 645 SMCs (13.60%) was not possible to be structured due to content- and structure-related issues. Of these, a subset of 415 SMCs (64.34%) was considered not remediable, as supplementary medical knowledge would have been needed or the linkage among the sentence components was too complex. The main category “Diagnosis and Study” contained these two subcategories to the largest parts and thus were the least structurable. In the inclusion criteria, reasons for lacking structurability varied, while missing supplementary medical knowledge was the largest factor within the exclusion criteria. Conclusion  Our results suggest that further improvement of eligibility criterion phrasing only marginally contributes to increased structurability. Instead, physician-based confirmation of the matching results and the exclusion of factors harming the patient or biasing the study is needed. Georg Thieme Verlag KG 2021-05 2021-04-22 /pmc/articles/PMC8412998/ /pubmed/33890270 http://dx.doi.org/10.1055/s-0041-1724107 Text en The Author(s). This is an open access article published by Thieme under the terms of the Creative Commons Attribution-NonDerivative-NonCommercial License, permitting copying and reproduction so long as the original work is given appropriate credit. Contents may not be used for commercial purposes, or adapted, remixed, transformed or built upon. ( https://creativecommons.org/licenses/by-nc-nd/4.0/ ) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivatives License, which permits unrestricted reproduction and distribution, for non-commercial purposes only; and use and reproduction, but not distribution, of adapted material for non-commercial purposes only, provided the original work is properly cited.
spellingShingle Dieter, Julia
Dominick, Friederike
Knurr, Alexander
Ahlbrandt, Janko
Ückert, Frank
Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title_full Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title_fullStr Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title_full_unstemmed Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title_short Analysis of Not Structurable Oncological Study Eligibility Criteria for Improved Patient-Trial Matching
title_sort analysis of not structurable oncological study eligibility criteria for improved patient-trial matching
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8412998/
https://www.ncbi.nlm.nih.gov/pubmed/33890270
http://dx.doi.org/10.1055/s-0041-1724107
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