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Single-particle cryo-EM: alternative schemes to improve dose efficiency
Imaging of biomolecules by ionizing radiation, such as electrons, causes radiation damage which introduces structural and compositional changes of the specimen. The total number of high-energy electrons per surface area that can be used for imaging in cryogenic electron microscopy (cryo-EM) is sever...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8415325/ https://www.ncbi.nlm.nih.gov/pubmed/34475283 http://dx.doi.org/10.1107/S1600577521007931 |
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author | Zhang, Yue Lu, Peng-Han Rotunno, Enzo Troiani, Filippo van Schayck, J. Paul Tavabi, Amir H. Dunin-Borkowski, Rafal E. Grillo, Vincenzo Peters, Peter J. Ravelli, Raimond B. G. |
author_facet | Zhang, Yue Lu, Peng-Han Rotunno, Enzo Troiani, Filippo van Schayck, J. Paul Tavabi, Amir H. Dunin-Borkowski, Rafal E. Grillo, Vincenzo Peters, Peter J. Ravelli, Raimond B. G. |
author_sort | Zhang, Yue |
collection | PubMed |
description | Imaging of biomolecules by ionizing radiation, such as electrons, causes radiation damage which introduces structural and compositional changes of the specimen. The total number of high-energy electrons per surface area that can be used for imaging in cryogenic electron microscopy (cryo-EM) is severely restricted due to radiation damage, resulting in low signal-to-noise ratios (SNR). High resolution details are dampened by the transfer function of the microscope and detector, and are the first to be lost as radiation damage alters the individual molecules which are presumed to be identical during averaging. As a consequence, radiation damage puts a limit on the particle size and sample heterogeneity with which electron microscopy (EM) can deal. Since a transmission EM (TEM) image is formed from the scattering process of the electron by the specimen interaction potential, radiation damage is inevitable. However, we can aim to maximize the information transfer for a given dose and increase the SNR by finding alternatives to the conventional phase-contrast cryo-EM techniques. Here some alternative transmission electron microscopy techniques are reviewed, including phase plate, multi-pass transmission electron microscopy, off-axis holography, ptychography and a quantum sorter. Their prospects for providing more or complementary structural information within the limited lifetime of the sample are discussed. |
format | Online Article Text |
id | pubmed-8415325 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-84153252021-09-16 Single-particle cryo-EM: alternative schemes to improve dose efficiency Zhang, Yue Lu, Peng-Han Rotunno, Enzo Troiani, Filippo van Schayck, J. Paul Tavabi, Amir H. Dunin-Borkowski, Rafal E. Grillo, Vincenzo Peters, Peter J. Ravelli, Raimond B. G. J Synchrotron Radiat Radiation Damage Imaging of biomolecules by ionizing radiation, such as electrons, causes radiation damage which introduces structural and compositional changes of the specimen. The total number of high-energy electrons per surface area that can be used for imaging in cryogenic electron microscopy (cryo-EM) is severely restricted due to radiation damage, resulting in low signal-to-noise ratios (SNR). High resolution details are dampened by the transfer function of the microscope and detector, and are the first to be lost as radiation damage alters the individual molecules which are presumed to be identical during averaging. As a consequence, radiation damage puts a limit on the particle size and sample heterogeneity with which electron microscopy (EM) can deal. Since a transmission EM (TEM) image is formed from the scattering process of the electron by the specimen interaction potential, radiation damage is inevitable. However, we can aim to maximize the information transfer for a given dose and increase the SNR by finding alternatives to the conventional phase-contrast cryo-EM techniques. Here some alternative transmission electron microscopy techniques are reviewed, including phase plate, multi-pass transmission electron microscopy, off-axis holography, ptychography and a quantum sorter. Their prospects for providing more or complementary structural information within the limited lifetime of the sample are discussed. International Union of Crystallography 2021-08-26 /pmc/articles/PMC8415325/ /pubmed/34475283 http://dx.doi.org/10.1107/S1600577521007931 Text en © Yue Zhang et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Radiation Damage Zhang, Yue Lu, Peng-Han Rotunno, Enzo Troiani, Filippo van Schayck, J. Paul Tavabi, Amir H. Dunin-Borkowski, Rafal E. Grillo, Vincenzo Peters, Peter J. Ravelli, Raimond B. G. Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title | Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title_full | Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title_fullStr | Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title_full_unstemmed | Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title_short | Single-particle cryo-EM: alternative schemes to improve dose efficiency |
title_sort | single-particle cryo-em: alternative schemes to improve dose efficiency |
topic | Radiation Damage |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8415325/ https://www.ncbi.nlm.nih.gov/pubmed/34475283 http://dx.doi.org/10.1107/S1600577521007931 |
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