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A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometria...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8416164/ https://www.ncbi.nlm.nih.gov/pubmed/34485158 http://dx.doi.org/10.3389/fonc.2021.729219 |
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author | de Andrade, Diocésio Alves Pinto da Silva, Luciane Sussuchi Laus, Ana Carolina de Lima, Marcos Alves Berardinelli, Gustavo Nóriz da Silva, Vinicius Duval Matsushita, Graziela de Macedo Bonatelli, Murilo da Silva, Aline Larissa Virginio Evangelista, Adriane Feijó Carvalho, Jesus Paula Reis, Rui Manuel dos Reis, Ricardo |
author_facet | de Andrade, Diocésio Alves Pinto da Silva, Luciane Sussuchi Laus, Ana Carolina de Lima, Marcos Alves Berardinelli, Gustavo Nóriz da Silva, Vinicius Duval Matsushita, Graziela de Macedo Bonatelli, Murilo da Silva, Aline Larissa Virginio Evangelista, Adriane Feijó Carvalho, Jesus Paula Reis, Rui Manuel dos Reis, Ricardo |
author_sort | de Andrade, Diocésio Alves Pinto |
collection | PubMed |
description | BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometrial Cancer (ProMisE). We attempted to determine a genetic signature to build a recurrence risk score in patients diagnosed with low- and intermediate-risk endometrial cancer. METHODS: A case-control study was conducted. The eligible patients were women diagnosed with recurrence low- and intermediate-risk endometrial cancer between January 2009 and December 2014 at a single institution; the recurrence patients were matched to two nonrecurrence patients with the same diagnosis by age and surgical staging. Following RNA isolation of 51 cases, 17 recurrence and 34 nonrecurrence patients, the expression profile was determined using the nCounter(®) PanCancer Pathways Panel, which contains 770 genes. RESULTS: The expression profile was successfully characterized in 49/51 (96.1%) cases. We identified 12 genes differentially expressed between the recurrence and nonrecurrence groups. The ROC curve for each gene was generated, and all had AUCs higher than 0.7. After backward stepwise logistic regression, four genes were highlighted: FN1, DUSP4, LEF1, and SMAD9. The recurrence risk score was calculated, leading to a ROC curve of the 4-gene model with an AUC of 0.93, sensitivity of 100%, and specificity of 72.7%. CONCLUSION: We identified a four-gene signature that may be associated with recurrence in patients with low- and intermediate-risk endometrial cancer. This finding suggests a new prognostic factor in this poorly explored group of patients with endometrial cancer. |
format | Online Article Text |
id | pubmed-8416164 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84161642021-09-04 A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer de Andrade, Diocésio Alves Pinto da Silva, Luciane Sussuchi Laus, Ana Carolina de Lima, Marcos Alves Berardinelli, Gustavo Nóriz da Silva, Vinicius Duval Matsushita, Graziela de Macedo Bonatelli, Murilo da Silva, Aline Larissa Virginio Evangelista, Adriane Feijó Carvalho, Jesus Paula Reis, Rui Manuel dos Reis, Ricardo Front Oncol Oncology BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometrial Cancer (ProMisE). We attempted to determine a genetic signature to build a recurrence risk score in patients diagnosed with low- and intermediate-risk endometrial cancer. METHODS: A case-control study was conducted. The eligible patients were women diagnosed with recurrence low- and intermediate-risk endometrial cancer between January 2009 and December 2014 at a single institution; the recurrence patients were matched to two nonrecurrence patients with the same diagnosis by age and surgical staging. Following RNA isolation of 51 cases, 17 recurrence and 34 nonrecurrence patients, the expression profile was determined using the nCounter(®) PanCancer Pathways Panel, which contains 770 genes. RESULTS: The expression profile was successfully characterized in 49/51 (96.1%) cases. We identified 12 genes differentially expressed between the recurrence and nonrecurrence groups. The ROC curve for each gene was generated, and all had AUCs higher than 0.7. After backward stepwise logistic regression, four genes were highlighted: FN1, DUSP4, LEF1, and SMAD9. The recurrence risk score was calculated, leading to a ROC curve of the 4-gene model with an AUC of 0.93, sensitivity of 100%, and specificity of 72.7%. CONCLUSION: We identified a four-gene signature that may be associated with recurrence in patients with low- and intermediate-risk endometrial cancer. This finding suggests a new prognostic factor in this poorly explored group of patients with endometrial cancer. Frontiers Media S.A. 2021-08-17 /pmc/articles/PMC8416164/ /pubmed/34485158 http://dx.doi.org/10.3389/fonc.2021.729219 Text en Copyright © 2021 de Andrade, da Silva, Laus, de Lima, Berardinelli, da Silva, Matsushita, Bonatelli, da Silva, Evangelista, Carvalho, Reis and dos Reis https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology de Andrade, Diocésio Alves Pinto da Silva, Luciane Sussuchi Laus, Ana Carolina de Lima, Marcos Alves Berardinelli, Gustavo Nóriz da Silva, Vinicius Duval Matsushita, Graziela de Macedo Bonatelli, Murilo da Silva, Aline Larissa Virginio Evangelista, Adriane Feijó Carvalho, Jesus Paula Reis, Rui Manuel dos Reis, Ricardo A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title | A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title_full | A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title_fullStr | A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title_full_unstemmed | A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title_short | A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer |
title_sort | 4-gene signature associated with recurrence in low- and intermediate-risk endometrial cancer |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8416164/ https://www.ncbi.nlm.nih.gov/pubmed/34485158 http://dx.doi.org/10.3389/fonc.2021.729219 |
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