Cargando…

A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer

BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometria...

Descripción completa

Detalles Bibliográficos
Autores principales: de Andrade, Diocésio Alves Pinto, da Silva, Luciane Sussuchi, Laus, Ana Carolina, de Lima, Marcos Alves, Berardinelli, Gustavo Nóriz, da Silva, Vinicius Duval, Matsushita, Graziela de Macedo, Bonatelli, Murilo, da Silva, Aline Larissa Virginio, Evangelista, Adriane Feijó, Carvalho, Jesus Paula, Reis, Rui Manuel, dos Reis, Ricardo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8416164/
https://www.ncbi.nlm.nih.gov/pubmed/34485158
http://dx.doi.org/10.3389/fonc.2021.729219
_version_ 1783748122556497920
author de Andrade, Diocésio Alves Pinto
da Silva, Luciane Sussuchi
Laus, Ana Carolina
de Lima, Marcos Alves
Berardinelli, Gustavo Nóriz
da Silva, Vinicius Duval
Matsushita, Graziela de Macedo
Bonatelli, Murilo
da Silva, Aline Larissa Virginio
Evangelista, Adriane Feijó
Carvalho, Jesus Paula
Reis, Rui Manuel
dos Reis, Ricardo
author_facet de Andrade, Diocésio Alves Pinto
da Silva, Luciane Sussuchi
Laus, Ana Carolina
de Lima, Marcos Alves
Berardinelli, Gustavo Nóriz
da Silva, Vinicius Duval
Matsushita, Graziela de Macedo
Bonatelli, Murilo
da Silva, Aline Larissa Virginio
Evangelista, Adriane Feijó
Carvalho, Jesus Paula
Reis, Rui Manuel
dos Reis, Ricardo
author_sort de Andrade, Diocésio Alves Pinto
collection PubMed
description BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometrial Cancer (ProMisE). We attempted to determine a genetic signature to build a recurrence risk score in patients diagnosed with low- and intermediate-risk endometrial cancer. METHODS: A case-control study was conducted. The eligible patients were women diagnosed with recurrence low- and intermediate-risk endometrial cancer between January 2009 and December 2014 at a single institution; the recurrence patients were matched to two nonrecurrence patients with the same diagnosis by age and surgical staging. Following RNA isolation of 51 cases, 17 recurrence and 34 nonrecurrence patients, the expression profile was determined using the nCounter(®) PanCancer Pathways Panel, which contains 770 genes. RESULTS: The expression profile was successfully characterized in 49/51 (96.1%) cases. We identified 12 genes differentially expressed between the recurrence and nonrecurrence groups. The ROC curve for each gene was generated, and all had AUCs higher than 0.7. After backward stepwise logistic regression, four genes were highlighted: FN1, DUSP4, LEF1, and SMAD9. The recurrence risk score was calculated, leading to a ROC curve of the 4-gene model with an AUC of 0.93, sensitivity of 100%, and specificity of 72.7%. CONCLUSION: We identified a four-gene signature that may be associated with recurrence in patients with low- and intermediate-risk endometrial cancer. This finding suggests a new prognostic factor in this poorly explored group of patients with endometrial cancer.
format Online
Article
Text
id pubmed-8416164
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-84161642021-09-04 A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer de Andrade, Diocésio Alves Pinto da Silva, Luciane Sussuchi Laus, Ana Carolina de Lima, Marcos Alves Berardinelli, Gustavo Nóriz da Silva, Vinicius Duval Matsushita, Graziela de Macedo Bonatelli, Murilo da Silva, Aline Larissa Virginio Evangelista, Adriane Feijó Carvalho, Jesus Paula Reis, Rui Manuel dos Reis, Ricardo Front Oncol Oncology BACKGROUND: The molecular profile of endometrial cancer has become an important tool in determining patient prognosis and their optimal adjuvant treatment. In addition to The Cancer Genome Atlas (TCGA), simpler tools have been developed, such as the Proactive Molecular Risk Classifier for Endometrial Cancer (ProMisE). We attempted to determine a genetic signature to build a recurrence risk score in patients diagnosed with low- and intermediate-risk endometrial cancer. METHODS: A case-control study was conducted. The eligible patients were women diagnosed with recurrence low- and intermediate-risk endometrial cancer between January 2009 and December 2014 at a single institution; the recurrence patients were matched to two nonrecurrence patients with the same diagnosis by age and surgical staging. Following RNA isolation of 51 cases, 17 recurrence and 34 nonrecurrence patients, the expression profile was determined using the nCounter(®) PanCancer Pathways Panel, which contains 770 genes. RESULTS: The expression profile was successfully characterized in 49/51 (96.1%) cases. We identified 12 genes differentially expressed between the recurrence and nonrecurrence groups. The ROC curve for each gene was generated, and all had AUCs higher than 0.7. After backward stepwise logistic regression, four genes were highlighted: FN1, DUSP4, LEF1, and SMAD9. The recurrence risk score was calculated, leading to a ROC curve of the 4-gene model with an AUC of 0.93, sensitivity of 100%, and specificity of 72.7%. CONCLUSION: We identified a four-gene signature that may be associated with recurrence in patients with low- and intermediate-risk endometrial cancer. This finding suggests a new prognostic factor in this poorly explored group of patients with endometrial cancer. Frontiers Media S.A. 2021-08-17 /pmc/articles/PMC8416164/ /pubmed/34485158 http://dx.doi.org/10.3389/fonc.2021.729219 Text en Copyright © 2021 de Andrade, da Silva, Laus, de Lima, Berardinelli, da Silva, Matsushita, Bonatelli, da Silva, Evangelista, Carvalho, Reis and dos Reis https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
de Andrade, Diocésio Alves Pinto
da Silva, Luciane Sussuchi
Laus, Ana Carolina
de Lima, Marcos Alves
Berardinelli, Gustavo Nóriz
da Silva, Vinicius Duval
Matsushita, Graziela de Macedo
Bonatelli, Murilo
da Silva, Aline Larissa Virginio
Evangelista, Adriane Feijó
Carvalho, Jesus Paula
Reis, Rui Manuel
dos Reis, Ricardo
A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title_full A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title_fullStr A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title_full_unstemmed A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title_short A 4-Gene Signature Associated With Recurrence in Low- and Intermediate-Risk Endometrial Cancer
title_sort 4-gene signature associated with recurrence in low- and intermediate-risk endometrial cancer
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8416164/
https://www.ncbi.nlm.nih.gov/pubmed/34485158
http://dx.doi.org/10.3389/fonc.2021.729219
work_keys_str_mv AT deandradediocesioalvespinto a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvalucianesussuchi a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT lausanacarolina a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT delimamarcosalves a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT berardinelligustavonoriz a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvaviniciusduval a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT matsushitagrazielademacedo a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT bonatellimurilo a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvaalinelarissavirginio a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT evangelistaadrianefeijo a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT carvalhojesuspaula a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT reisruimanuel a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dosreisricardo a4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT deandradediocesioalvespinto 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvalucianesussuchi 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT lausanacarolina 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT delimamarcosalves 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT berardinelligustavonoriz 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvaviniciusduval 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT matsushitagrazielademacedo 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT bonatellimurilo 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dasilvaalinelarissavirginio 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT evangelistaadrianefeijo 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT carvalhojesuspaula 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT reisruimanuel 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer
AT dosreisricardo 4genesignatureassociatedwithrecurrenceinlowandintermediateriskendometrialcancer