Cargando…

A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer

Bladder cancer (BC) belongs to one of the most common and highly heterogeneous malignancies. Ferroptosis is a newly discovered regulated cell death (RCD), characterized by accumulation of toxic lipid peroxides, and plays a crucial role in tumor progression. Here, we conducted a comprehensive analysi...

Descripción completa

Detalles Bibliográficos
Autores principales: Yan, Yilin, Cai, Jinming, Huang, Zhengnan, Cao, Xiangqian, Tang, Pengfei, Wang, Zeyi, Zhang, Fang, Xia, Shujie, Shen, Bing
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8417704/
https://www.ncbi.nlm.nih.gov/pubmed/34490263
http://dx.doi.org/10.3389/fcell.2021.712230
_version_ 1783748434497372160
author Yan, Yilin
Cai, Jinming
Huang, Zhengnan
Cao, Xiangqian
Tang, Pengfei
Wang, Zeyi
Zhang, Fang
Xia, Shujie
Shen, Bing
author_facet Yan, Yilin
Cai, Jinming
Huang, Zhengnan
Cao, Xiangqian
Tang, Pengfei
Wang, Zeyi
Zhang, Fang
Xia, Shujie
Shen, Bing
author_sort Yan, Yilin
collection PubMed
description Bladder cancer (BC) belongs to one of the most common and highly heterogeneous malignancies. Ferroptosis is a newly discovered regulated cell death (RCD), characterized by accumulation of toxic lipid peroxides, and plays a crucial role in tumor progression. Here, we conducted a comprehensive analysis on the transcriptomics data of ferroptosis-related genes in BC based on The Cancer Genome Atlas (TCGA) and three Gene Expression Omnibus (GEO) datasets. In our study, a 6-gene signature was identified based on the potential prognostic ferroptotic regulatory genes. Furthermore, our signature revealed a good independent prognostic ability in BC. Patients with low-risk score exhibited higher FGFR3 mutation rates while high risk score had a positive association with higher RB1 mutation rates. Meanwhile, higher proportions of macrophages were observed in high BC risk group simultaneously with four methods. Unexpectedly, the risk score showed a significant positive correlation with epithelial-mesenchymal transition (EMT) status. Functional assays indicated that CRYAB and SQLE knockdown was associated with attenuated invasion capacity. Our study revealed a ferroptosis-related risk model for predicting prognostic and BC progression. Our results indicate that targeting ferroptosis may be a therapeutic strategy for BC.
format Online
Article
Text
id pubmed-8417704
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-84177042021-09-05 A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer Yan, Yilin Cai, Jinming Huang, Zhengnan Cao, Xiangqian Tang, Pengfei Wang, Zeyi Zhang, Fang Xia, Shujie Shen, Bing Front Cell Dev Biol Cell and Developmental Biology Bladder cancer (BC) belongs to one of the most common and highly heterogeneous malignancies. Ferroptosis is a newly discovered regulated cell death (RCD), characterized by accumulation of toxic lipid peroxides, and plays a crucial role in tumor progression. Here, we conducted a comprehensive analysis on the transcriptomics data of ferroptosis-related genes in BC based on The Cancer Genome Atlas (TCGA) and three Gene Expression Omnibus (GEO) datasets. In our study, a 6-gene signature was identified based on the potential prognostic ferroptotic regulatory genes. Furthermore, our signature revealed a good independent prognostic ability in BC. Patients with low-risk score exhibited higher FGFR3 mutation rates while high risk score had a positive association with higher RB1 mutation rates. Meanwhile, higher proportions of macrophages were observed in high BC risk group simultaneously with four methods. Unexpectedly, the risk score showed a significant positive correlation with epithelial-mesenchymal transition (EMT) status. Functional assays indicated that CRYAB and SQLE knockdown was associated with attenuated invasion capacity. Our study revealed a ferroptosis-related risk model for predicting prognostic and BC progression. Our results indicate that targeting ferroptosis may be a therapeutic strategy for BC. Frontiers Media S.A. 2021-08-20 /pmc/articles/PMC8417704/ /pubmed/34490263 http://dx.doi.org/10.3389/fcell.2021.712230 Text en Copyright © 2021 Yan, Cai, Huang, Cao, Tang, Wang, Zhang, Xia and Shen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Cell and Developmental Biology
Yan, Yilin
Cai, Jinming
Huang, Zhengnan
Cao, Xiangqian
Tang, Pengfei
Wang, Zeyi
Zhang, Fang
Xia, Shujie
Shen, Bing
A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title_full A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title_fullStr A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title_full_unstemmed A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title_short A Novel Ferroptosis-Related Prognostic Signature Reveals Macrophage Infiltration and EMT Status in Bladder Cancer
title_sort novel ferroptosis-related prognostic signature reveals macrophage infiltration and emt status in bladder cancer
topic Cell and Developmental Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8417704/
https://www.ncbi.nlm.nih.gov/pubmed/34490263
http://dx.doi.org/10.3389/fcell.2021.712230
work_keys_str_mv AT yanyilin anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT caijinming anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT huangzhengnan anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT caoxiangqian anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT tangpengfei anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT wangzeyi anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT zhangfang anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT xiashujie anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT shenbing anovelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT yanyilin novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT caijinming novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT huangzhengnan novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT caoxiangqian novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT tangpengfei novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT wangzeyi novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT zhangfang novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT xiashujie novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer
AT shenbing novelferroptosisrelatedprognosticsignaturerevealsmacrophageinfiltrationandemtstatusinbladdercancer