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Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology
BACKGROUND: Increasing attention has been paid to the effect of Epimedium on the nervous system, particularly anti-depression function. In the present study, we applied network pharmacology to introduce a testable hypothesis on the multi-target mechanisms of Epicedium against depression. METHODS: By...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8417989/ https://www.ncbi.nlm.nih.gov/pubmed/34479552 http://dx.doi.org/10.1186/s12906-021-03389-w |
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author | Dong, Yankai Tao, Bo Xue, Xing Feng, Caixia Ren, Yating Ma, Hengyu Zhang, Junli Si, Yufang Zhang, Sisi Liu, Si Li, Hui Zhou, Jiahao Li, Ge Wang, Zhifei Xie, Juanping Zhu, Zhongliang |
author_facet | Dong, Yankai Tao, Bo Xue, Xing Feng, Caixia Ren, Yating Ma, Hengyu Zhang, Junli Si, Yufang Zhang, Sisi Liu, Si Li, Hui Zhou, Jiahao Li, Ge Wang, Zhifei Xie, Juanping Zhu, Zhongliang |
author_sort | Dong, Yankai |
collection | PubMed |
description | BACKGROUND: Increasing attention has been paid to the effect of Epimedium on the nervous system, particularly anti-depression function. In the present study, we applied network pharmacology to introduce a testable hypothesis on the multi-target mechanisms of Epicedium against depression. METHODS: By reconstructing the network of protein–protein interaction and drug–component–target, we predicted the key protein targets of Epicedium for the treatment of depression. Then, through molecular docking, the interaction of the main active components of Epicedium and predicted candidate targets were verified. RESULTS: Nineteen active compounds were selected from Epicedium. There were 200 targets associated with Epicedium and 537 targets related to depression. The key targets of Epicedium for treating depression were IL6, VEGFA, AKT1, and EGF. According to gene ontology functional enrichment analysis, 22 items of biological process (BP), 13 items of cell composition (CC) and 9 items of molecular function (MF) were obtained. A total of 56 signaling pathways (P < 0.05) were identified by Kyoto Encyclopedia of Genes and Genomes analysis, mainly involving depression-related pathways such as dopaminergic synapse, TNF signaling pathway, and prolactin signaling pathway. The results of molecular docking showed that the most important activity components, including luteoklin, quercetin and kaempferol, were well combined with the key targets. CONCLUSIONS: Luteoklin, quercetin, kaempferol and other active compounds in Epicedium can regulate multiple signaling pathways and targets such as IL6, AKT1, and EGF, therefore playing therapeutic roles in depression. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03389-w. |
format | Online Article Text |
id | pubmed-8417989 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-84179892021-09-09 Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology Dong, Yankai Tao, Bo Xue, Xing Feng, Caixia Ren, Yating Ma, Hengyu Zhang, Junli Si, Yufang Zhang, Sisi Liu, Si Li, Hui Zhou, Jiahao Li, Ge Wang, Zhifei Xie, Juanping Zhu, Zhongliang BMC Complement Med Ther Research Article BACKGROUND: Increasing attention has been paid to the effect of Epimedium on the nervous system, particularly anti-depression function. In the present study, we applied network pharmacology to introduce a testable hypothesis on the multi-target mechanisms of Epicedium against depression. METHODS: By reconstructing the network of protein–protein interaction and drug–component–target, we predicted the key protein targets of Epicedium for the treatment of depression. Then, through molecular docking, the interaction of the main active components of Epicedium and predicted candidate targets were verified. RESULTS: Nineteen active compounds were selected from Epicedium. There were 200 targets associated with Epicedium and 537 targets related to depression. The key targets of Epicedium for treating depression were IL6, VEGFA, AKT1, and EGF. According to gene ontology functional enrichment analysis, 22 items of biological process (BP), 13 items of cell composition (CC) and 9 items of molecular function (MF) were obtained. A total of 56 signaling pathways (P < 0.05) were identified by Kyoto Encyclopedia of Genes and Genomes analysis, mainly involving depression-related pathways such as dopaminergic synapse, TNF signaling pathway, and prolactin signaling pathway. The results of molecular docking showed that the most important activity components, including luteoklin, quercetin and kaempferol, were well combined with the key targets. CONCLUSIONS: Luteoklin, quercetin, kaempferol and other active compounds in Epicedium can regulate multiple signaling pathways and targets such as IL6, AKT1, and EGF, therefore playing therapeutic roles in depression. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12906-021-03389-w. BioMed Central 2021-09-03 /pmc/articles/PMC8417989/ /pubmed/34479552 http://dx.doi.org/10.1186/s12906-021-03389-w Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Dong, Yankai Tao, Bo Xue, Xing Feng, Caixia Ren, Yating Ma, Hengyu Zhang, Junli Si, Yufang Zhang, Sisi Liu, Si Li, Hui Zhou, Jiahao Li, Ge Wang, Zhifei Xie, Juanping Zhu, Zhongliang Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title | Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title_full | Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title_fullStr | Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title_full_unstemmed | Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title_short | Molecular mechanism of Epicedium treatment for depression based on network pharmacology and molecular docking technology |
title_sort | molecular mechanism of epicedium treatment for depression based on network pharmacology and molecular docking technology |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8417989/ https://www.ncbi.nlm.nih.gov/pubmed/34479552 http://dx.doi.org/10.1186/s12906-021-03389-w |
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