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Pooled analysis of LAMP assay for the diagnosis of norovirus infection

BACKGROUND: Rapid laboratory detection is essential to diagnose norovirus infection. LAMP has many advantages compared with RT‐PCR for detecting norovirus, including high sensitivity, high specificity, rapidity, low cost, and intuitive results, which can be easily read with the naked eye with the he...

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Autores principales: Qian, Xi‐Feng, Duan, Ai‐Ling, Huang, Rong‐Xian, Li, Nan‐Xi, Li, Ya‐Ping, Guo, Xu‐Guang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8418469/
https://www.ncbi.nlm.nih.gov/pubmed/34331319
http://dx.doi.org/10.1002/jcla.23919
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author Qian, Xi‐Feng
Duan, Ai‐Ling
Huang, Rong‐Xian
Li, Nan‐Xi
Li, Ya‐Ping
Guo, Xu‐Guang
author_facet Qian, Xi‐Feng
Duan, Ai‐Ling
Huang, Rong‐Xian
Li, Nan‐Xi
Li, Ya‐Ping
Guo, Xu‐Guang
author_sort Qian, Xi‐Feng
collection PubMed
description BACKGROUND: Rapid laboratory detection is essential to diagnose norovirus infection. LAMP has many advantages compared with RT‐PCR for detecting norovirus, including high sensitivity, high specificity, rapidity, low cost, and intuitive results, which can be easily read with the naked eye with the help of color‐based reporters. In this study, we intend to analyze the accuracy of LAMP methods for the diagnosis of norovirus infection. METHODS: Two researchers independently retrieved relevant literature up to January 2021 (PubMed, Web of Science, Cochrane Library, Embase, CNKI, Wan Fang, and VIP). The researchers screened all articles and extracted their research data for meta‐analysis. QUADAS‐2 tool was used to evaluate the quality of the included studies by Review Manager 5.3. Forest plots were performed by Meta‐DiSc 1.4 to evaluate the accuracy of the test. Deeks’ funnel plot symmetry tests were conducted by Stata 15.0 to check the potential publication bias. RESULTS: Eleven sets of data extracted from the eight included studies were included for meta‐analysis. For the detection of norovirus, the pooled sensitivity, specificity, positive LR, negative LR, diagnostic OR, and their 95% CI were 0.96 (0.95–0.97), 0.99 (0.99–1.00), 91.14 (31.88–260.56), 0.06 (0.04–0.09), and 1473.68 (562.96–3857.70), respectively. Besides, AUC in the SROC curve was 0.9920. CONCLUSION: LAMP had high sensitivity and specificity in terms of the diagnosis of norovirus infection. However, further extension of this approach should be researched to ensure the accuracy and practicability of this hopeful test in the future.
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spelling pubmed-84184692021-09-08 Pooled analysis of LAMP assay for the diagnosis of norovirus infection Qian, Xi‐Feng Duan, Ai‐Ling Huang, Rong‐Xian Li, Nan‐Xi Li, Ya‐Ping Guo, Xu‐Guang J Clin Lab Anal Research Articles BACKGROUND: Rapid laboratory detection is essential to diagnose norovirus infection. LAMP has many advantages compared with RT‐PCR for detecting norovirus, including high sensitivity, high specificity, rapidity, low cost, and intuitive results, which can be easily read with the naked eye with the help of color‐based reporters. In this study, we intend to analyze the accuracy of LAMP methods for the diagnosis of norovirus infection. METHODS: Two researchers independently retrieved relevant literature up to January 2021 (PubMed, Web of Science, Cochrane Library, Embase, CNKI, Wan Fang, and VIP). The researchers screened all articles and extracted their research data for meta‐analysis. QUADAS‐2 tool was used to evaluate the quality of the included studies by Review Manager 5.3. Forest plots were performed by Meta‐DiSc 1.4 to evaluate the accuracy of the test. Deeks’ funnel plot symmetry tests were conducted by Stata 15.0 to check the potential publication bias. RESULTS: Eleven sets of data extracted from the eight included studies were included for meta‐analysis. For the detection of norovirus, the pooled sensitivity, specificity, positive LR, negative LR, diagnostic OR, and their 95% CI were 0.96 (0.95–0.97), 0.99 (0.99–1.00), 91.14 (31.88–260.56), 0.06 (0.04–0.09), and 1473.68 (562.96–3857.70), respectively. Besides, AUC in the SROC curve was 0.9920. CONCLUSION: LAMP had high sensitivity and specificity in terms of the diagnosis of norovirus infection. However, further extension of this approach should be researched to ensure the accuracy and practicability of this hopeful test in the future. John Wiley and Sons Inc. 2021-07-31 /pmc/articles/PMC8418469/ /pubmed/34331319 http://dx.doi.org/10.1002/jcla.23919 Text en © 2021 The Authors. Journal of Clinical Laboratory Analysis published by Wiley Periodicals LLC. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Qian, Xi‐Feng
Duan, Ai‐Ling
Huang, Rong‐Xian
Li, Nan‐Xi
Li, Ya‐Ping
Guo, Xu‐Guang
Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title_full Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title_fullStr Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title_full_unstemmed Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title_short Pooled analysis of LAMP assay for the diagnosis of norovirus infection
title_sort pooled analysis of lamp assay for the diagnosis of norovirus infection
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8418469/
https://www.ncbi.nlm.nih.gov/pubmed/34331319
http://dx.doi.org/10.1002/jcla.23919
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