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Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene

Five new spiro­[indoline-3,3′-indolizine]s have been synthesized with high regio- and stereo­specificity in one-pot three-com­ponent reactions between a sub­sti­tuted indole-2,3-dione, (S)-pipecolic acid and trans-3-benzoyl­acrylic acid, and subsequently characterized using a combination of elementa...

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Autores principales: Romo, Pablo E., Quiroga, Jairo, Cobo, Justo, Glidewell, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8418672/
https://www.ncbi.nlm.nih.gov/pubmed/34482292
http://dx.doi.org/10.1107/S2053229621007142
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author Romo, Pablo E.
Quiroga, Jairo
Cobo, Justo
Glidewell, Christopher
author_facet Romo, Pablo E.
Quiroga, Jairo
Cobo, Justo
Glidewell, Christopher
author_sort Romo, Pablo E.
collection PubMed
description Five new spiro­[indoline-3,3′-indolizine]s have been synthesized with high regio- and stereo­specificity in one-pot three-com­ponent reactions between a sub­sti­tuted indole-2,3-dione, (S)-pipecolic acid and trans-3-benzoyl­acrylic acid, and subsequently characterized using a combination of elemental analysis, IR and (1)H and (13)C NMR spectroscopy, mass spectrometry and crystal structure analysis. (1′SR,2′SR,3RS,8a′RS)-2′-Benzoyl-5-fluoro-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(23)H(21)FN(2)O(4), (I), and (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-5-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hy­dro-2′H-spiro[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(24)N(2)O(4), (II), are isomorphous, as are (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-1-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(24)N(2)O(4), (III), and (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-5-chloro-1-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(23)ClN(2)O(4), (IV). Within each isomorphous pair, the spiro ring systems show some conformational differences. In each of (I) and (II), the mol­ecules are linked into com­plex sheets by a combination of four types of hydrogen bond, and in each of (III) and (IV), a combination of O—H⋯O and C—H⋯π(arene) hydrogen bonds links the mol­ecules to form a chain of centrosymmetric rings. In (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-1-hexyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(29)H(34)N(2)O(4), (V), a combination of five hydrogen bonds links the mol­ecules into sheets of alternating R (2) (2)(16) and R (6) (6)(46) rings. A mechanism is proposed for the formation of com­pounds (I)–(V) and some com­parisons with related structures are made.
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spelling pubmed-84186722021-09-16 Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene Romo, Pablo E. Quiroga, Jairo Cobo, Justo Glidewell, Christopher Acta Crystallogr C Struct Chem Research Papers Five new spiro­[indoline-3,3′-indolizine]s have been synthesized with high regio- and stereo­specificity in one-pot three-com­ponent reactions between a sub­sti­tuted indole-2,3-dione, (S)-pipecolic acid and trans-3-benzoyl­acrylic acid, and subsequently characterized using a combination of elemental analysis, IR and (1)H and (13)C NMR spectroscopy, mass spectrometry and crystal structure analysis. (1′SR,2′SR,3RS,8a′RS)-2′-Benzoyl-5-fluoro-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(23)H(21)FN(2)O(4), (I), and (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-5-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hy­dro-2′H-spiro[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(24)N(2)O(4), (II), are isomorphous, as are (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-1-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(24)N(2)O(4), (III), and (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-5-chloro-1-methyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(24)H(23)ClN(2)O(4), (IV). Within each isomorphous pair, the spiro ring systems show some conformational differences. In each of (I) and (II), the mol­ecules are linked into com­plex sheets by a combination of four types of hydrogen bond, and in each of (III) and (IV), a combination of O—H⋯O and C—H⋯π(arene) hydrogen bonds links the mol­ecules to form a chain of centrosymmetric rings. In (1′SR,2′SR,3RS,8a′RS)-2′-benzoyl-1-hexyl-2-oxo-1′,5′,6′,7′,8′,8a′-hexa­hydro-2′H-spiro­[indoline-3,3′-indolizine]-1′-carb­oxy­lic acid, C(29)H(34)N(2)O(4), (V), a combination of five hydrogen bonds links the mol­ecules into sheets of alternating R (2) (2)(16) and R (6) (6)(46) rings. A mechanism is proposed for the formation of com­pounds (I)–(V) and some com­parisons with related structures are made. International Union of Crystallography 2021-08-06 /pmc/articles/PMC8418672/ /pubmed/34482292 http://dx.doi.org/10.1107/S2053229621007142 Text en © Romo et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Romo, Pablo E.
Quiroga, Jairo
Cobo, Justo
Glidewell, Christopher
Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title_full Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title_fullStr Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title_full_unstemmed Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title_short Synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
title_sort synthesis and spectroscopic and structural characterization of spiro­[indoline-3,3′-indolizine]s formed by 1,3-dipolar cyclo­additions between isatins, pipecolic acid and an electron-deficient alkene
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8418672/
https://www.ncbi.nlm.nih.gov/pubmed/34482292
http://dx.doi.org/10.1107/S2053229621007142
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