Cargando…
Oncogene Concatenated Enriched Amplicon Nanopore Sequencing for rapid, accurate, and affordable somatic mutation detection
We develop the Oncogene Concatenated Enriched Amplicon Nanopore Sequencing (OCEANS) method, in which variants with low variant allele frequency (VAFs) are amplified and subsequently concatenated for Nanopore Sequencing. OCEANS allows accurate detection of somatic mutations with VAF limits of detecti...
Autores principales: | Thirunavukarasu, Deepak, Cheng, Lauren Y., Song, Ping, Chen, Sherry X., Borad, Mitesh J., Kwong, Lawrence, James, Phillip, Turner, Daniel J., Zhang, David Yu |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8419911/ https://www.ncbi.nlm.nih.gov/pubmed/34482832 http://dx.doi.org/10.1186/s13059-021-02449-1 |
Ejemplares similares
-
Rapid and Accurate Detection of SARS Coronavirus 2 by Nanopore Amplicon Sequencing
por: Li, Xiao-xiao, et al.
Publicado: (2022) -
An amplicon-based sequencing framework for accurately measuring intrahost virus diversity using PrimalSeq and iVar
por: Grubaugh, Nathan D., et al.
Publicado: (2019) -
Virmid: accurate detection of somatic mutations with sample impurity inference
por: Kim, Sangwoo, et al.
Publicado: (2013) -
Nanopore adaptive sampling: a tool for enrichment of low abundance species in metagenomic samples
por: Martin, Samuel, et al.
Publicado: (2022) -
Genome enrichment of rare and unknown species from complicated microbiomes by nanopore selective sequencing
por: Sun, Yuhong, et al.
Publicado: (2023)