Cargando…

Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids

Template design on polymorph control, especially conformational polymorphs, is still in its infancy and the result of polymorph control is often accidental. A method of regulating the crystallization of conformational polymorphs based on the crystal structure similarity of templates and the target c...

Descripción completa

Detalles Bibliográficos
Autores principales: Lin, Jiawei, Shi, Peng, Wang, Ying, Wang, Lingyu, Ma, Yiming, Liu, Fei, Wu, Songgu, Gong, Junbo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8420758/
https://www.ncbi.nlm.nih.gov/pubmed/34584742
http://dx.doi.org/10.1107/S2052252521007119
_version_ 1783748943586263040
author Lin, Jiawei
Shi, Peng
Wang, Ying
Wang, Lingyu
Ma, Yiming
Liu, Fei
Wu, Songgu
Gong, Junbo
author_facet Lin, Jiawei
Shi, Peng
Wang, Ying
Wang, Lingyu
Ma, Yiming
Liu, Fei
Wu, Songgu
Gong, Junbo
author_sort Lin, Jiawei
collection PubMed
description Template design on polymorph control, especially conformational polymorphs, is still in its infancy and the result of polymorph control is often accidental. A method of regulating the crystallization of conformational polymorphs based on the crystal structure similarity of templates and the target crystal form has been developed. Crystal structure similarity was considered to be able to introduce lattice matching (geometric term) with chemical interactions to regulate conformational polymorph nucleation. The method was successfully applied to induce the crystallization of DA7-II [HOOC–(CH(2))(n) (−2)–COOH (diacids), named DAn, where n = 7, 9, 15, 17 and II represents the metastable polymorph] on the surface of DA15-II. An analogous two-dimensional plane – the (002) face of both DA15-II and DA7-II – was firstly predicted as the epitaxially attached face with similar lattice parameters and the strongest adsorption energy. The powder DA15-II template with the preferred orientation face in (002) presented much stronger inducing DA7-II ability than the template with other preferred orientation faces. The epitaxial growth of DA7-II on DA15-II through an identical (002) face was clearly observed and verified by the single-crystal inducing experiments. The molecular dynamics simulation results demonstrated that the strong interactions occurred between DA7 molecules and the (002) face of DA15-II. This method has been verified and further applied to the crystallization of DA7-II on the surface of DA17-II and DA9-II on the surface of DA15-II. This study developed a strategy based on structure similarity to regulate the conformational polymorph and verified the significant role of lattice matching and chemical effects on the design and preparation of templates.
format Online
Article
Text
id pubmed-8420758
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher International Union of Crystallography
record_format MEDLINE/PubMed
spelling pubmed-84207582021-09-27 Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids Lin, Jiawei Shi, Peng Wang, Ying Wang, Lingyu Ma, Yiming Liu, Fei Wu, Songgu Gong, Junbo IUCrJ Research Papers Template design on polymorph control, especially conformational polymorphs, is still in its infancy and the result of polymorph control is often accidental. A method of regulating the crystallization of conformational polymorphs based on the crystal structure similarity of templates and the target crystal form has been developed. Crystal structure similarity was considered to be able to introduce lattice matching (geometric term) with chemical interactions to regulate conformational polymorph nucleation. The method was successfully applied to induce the crystallization of DA7-II [HOOC–(CH(2))(n) (−2)–COOH (diacids), named DAn, where n = 7, 9, 15, 17 and II represents the metastable polymorph] on the surface of DA15-II. An analogous two-dimensional plane – the (002) face of both DA15-II and DA7-II – was firstly predicted as the epitaxially attached face with similar lattice parameters and the strongest adsorption energy. The powder DA15-II template with the preferred orientation face in (002) presented much stronger inducing DA7-II ability than the template with other preferred orientation faces. The epitaxial growth of DA7-II on DA15-II through an identical (002) face was clearly observed and verified by the single-crystal inducing experiments. The molecular dynamics simulation results demonstrated that the strong interactions occurred between DA7 molecules and the (002) face of DA15-II. This method has been verified and further applied to the crystallization of DA7-II on the surface of DA17-II and DA9-II on the surface of DA15-II. This study developed a strategy based on structure similarity to regulate the conformational polymorph and verified the significant role of lattice matching and chemical effects on the design and preparation of templates. International Union of Crystallography 2021-08-20 /pmc/articles/PMC8420758/ /pubmed/34584742 http://dx.doi.org/10.1107/S2052252521007119 Text en © Jiawei Lin et al. 2021 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.
spellingShingle Research Papers
Lin, Jiawei
Shi, Peng
Wang, Ying
Wang, Lingyu
Ma, Yiming
Liu, Fei
Wu, Songgu
Gong, Junbo
Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title_full Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title_fullStr Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title_full_unstemmed Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title_short Template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
title_sort template design based on molecular and crystal structure similarity to regulate conformational polymorphism nucleation: the case of α,ω-alkanedi­carb­oxy­lic acids
topic Research Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8420758/
https://www.ncbi.nlm.nih.gov/pubmed/34584742
http://dx.doi.org/10.1107/S2052252521007119
work_keys_str_mv AT linjiawei templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT shipeng templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT wangying templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT wanglingyu templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT mayiming templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT liufei templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT wusonggu templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids
AT gongjunbo templatedesignbasedonmolecularandcrystalstructuresimilaritytoregulateconformationalpolymorphismnucleationthecaseofaōalkanedicarboxylicacids