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Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma
Glioma is a frequently seen primary malignant intracranial tumor, characterized by poor prognosis. The study is aimed at constructing a prognostic model for risk stratification in patients suffering from glioma. Weighted gene coexpression network analysis (WGCNA), integrated transcriptome analysis,...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8420975/ https://www.ncbi.nlm.nih.gov/pubmed/34497663 http://dx.doi.org/10.1155/2021/2191709 |
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author | He, Jimin Zeng, Chun Long, Yong |
author_facet | He, Jimin Zeng, Chun Long, Yong |
author_sort | He, Jimin |
collection | PubMed |
description | Glioma is a frequently seen primary malignant intracranial tumor, characterized by poor prognosis. The study is aimed at constructing a prognostic model for risk stratification in patients suffering from glioma. Weighted gene coexpression network analysis (WGCNA), integrated transcriptome analysis, and combining immune-related genes (IRGs) were used to identify core differentially expressed IRGs (DE IRGs). Subsequently, univariate and multivariate Cox regression analyses were utilized to establish an immune-related risk score (IRRS) model for risk stratification for glioma patients. Furthermore, a nomogram was developed for predicting glioma patients' overall survival (OS). The turquoise module (cor = 0.67; P < 0.001) and its genes (n = 1092) were significantly pertinent to glioma progression. Ultimately, multivariate Cox regression analysis constructed an IRRS model based on VEGFA, SOCS3, SPP1, and TGFB2 core DE IRGs, with a C-index of 0.811 (95% CI: 0.786-0.836). Then, Kaplan-Meier (KM) survival curves revealed that patients presenting high risk had a dismal outcome (P < 0.0001). Also, this IRRS model was found to be an independent prognostic indicator of gliomas' survival prediction, with HR of 1.89 (95% CI: 1.252-2.85) and 2.17 (95% CI: 1.493-3.14) in the Cancer Genome Atlas (TCGA) and Chinese Glioma Genome Atlas (CGGA) datasets, respectively. We established the IRRS prognostic model, capable of effectively stratifying glioma population, convenient for decision-making in clinical practice. |
format | Online Article Text |
id | pubmed-8420975 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-84209752021-09-07 Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma He, Jimin Zeng, Chun Long, Yong Comput Math Methods Med Research Article Glioma is a frequently seen primary malignant intracranial tumor, characterized by poor prognosis. The study is aimed at constructing a prognostic model for risk stratification in patients suffering from glioma. Weighted gene coexpression network analysis (WGCNA), integrated transcriptome analysis, and combining immune-related genes (IRGs) were used to identify core differentially expressed IRGs (DE IRGs). Subsequently, univariate and multivariate Cox regression analyses were utilized to establish an immune-related risk score (IRRS) model for risk stratification for glioma patients. Furthermore, a nomogram was developed for predicting glioma patients' overall survival (OS). The turquoise module (cor = 0.67; P < 0.001) and its genes (n = 1092) were significantly pertinent to glioma progression. Ultimately, multivariate Cox regression analysis constructed an IRRS model based on VEGFA, SOCS3, SPP1, and TGFB2 core DE IRGs, with a C-index of 0.811 (95% CI: 0.786-0.836). Then, Kaplan-Meier (KM) survival curves revealed that patients presenting high risk had a dismal outcome (P < 0.0001). Also, this IRRS model was found to be an independent prognostic indicator of gliomas' survival prediction, with HR of 1.89 (95% CI: 1.252-2.85) and 2.17 (95% CI: 1.493-3.14) in the Cancer Genome Atlas (TCGA) and Chinese Glioma Genome Atlas (CGGA) datasets, respectively. We established the IRRS prognostic model, capable of effectively stratifying glioma population, convenient for decision-making in clinical practice. Hindawi 2021-08-27 /pmc/articles/PMC8420975/ /pubmed/34497663 http://dx.doi.org/10.1155/2021/2191709 Text en Copyright © 2021 Jimin He et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article He, Jimin Zeng, Chun Long, Yong Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title | Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title_full | Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title_fullStr | Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title_full_unstemmed | Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title_short | Establishment of an Immune-Related Gene Signature for Risk Stratification for Patients with Glioma |
title_sort | establishment of an immune-related gene signature for risk stratification for patients with glioma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8420975/ https://www.ncbi.nlm.nih.gov/pubmed/34497663 http://dx.doi.org/10.1155/2021/2191709 |
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