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Unsupervised domain adaptation based COVID-19 CT infection segmentation network

Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsup...

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Detalles Bibliográficos
Autores principales: Chen, Han, Jiang, Yifan, Loew, Murray, Ko, Hanseok
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8421243/
https://www.ncbi.nlm.nih.gov/pubmed/34764618
http://dx.doi.org/10.1007/s10489-021-02691-x
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author Chen, Han
Jiang, Yifan
Loew, Murray
Ko, Hanseok
author_facet Chen, Han
Jiang, Yifan
Loew, Murray
Ko, Hanseok
author_sort Chen, Han
collection PubMed
description Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsupervised domain adaptation based segmentation network to improve the segmentation performance of the infection areas in COVID-19 CT images. In particular, we propose to utilize the synthetic data and limited unlabeled real COVID-19 CT images to jointly train the segmentation network. Furthermore, we develop a novel domain adaptation module, which is used to align the two domains and effectively improve the segmentation network’s generalization capability to the real domain. Besides, we propose an unsupervised adversarial training scheme, which encourages the segmentation network to learn the domain-invariant feature, so that the robust feature can be used for segmentation. Experimental results demonstrate that our method can achieve state-of-the-art segmentation performance on COVID-19 CT images.
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spelling pubmed-84212432021-09-07 Unsupervised domain adaptation based COVID-19 CT infection segmentation network Chen, Han Jiang, Yifan Loew, Murray Ko, Hanseok Appl Intell (Dordr) Article Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsupervised domain adaptation based segmentation network to improve the segmentation performance of the infection areas in COVID-19 CT images. In particular, we propose to utilize the synthetic data and limited unlabeled real COVID-19 CT images to jointly train the segmentation network. Furthermore, we develop a novel domain adaptation module, which is used to align the two domains and effectively improve the segmentation network’s generalization capability to the real domain. Besides, we propose an unsupervised adversarial training scheme, which encourages the segmentation network to learn the domain-invariant feature, so that the robust feature can be used for segmentation. Experimental results demonstrate that our method can achieve state-of-the-art segmentation performance on COVID-19 CT images. Springer US 2021-09-07 2022 /pmc/articles/PMC8421243/ /pubmed/34764618 http://dx.doi.org/10.1007/s10489-021-02691-x Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.
spellingShingle Article
Chen, Han
Jiang, Yifan
Loew, Murray
Ko, Hanseok
Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title_full Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title_fullStr Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title_full_unstemmed Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title_short Unsupervised domain adaptation based COVID-19 CT infection segmentation network
title_sort unsupervised domain adaptation based covid-19 ct infection segmentation network
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8421243/
https://www.ncbi.nlm.nih.gov/pubmed/34764618
http://dx.doi.org/10.1007/s10489-021-02691-x
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AT kohanseok unsuperviseddomainadaptationbasedcovid19ctinfectionsegmentationnetwork