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Unsupervised domain adaptation based COVID-19 CT infection segmentation network
Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsup...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer US
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8421243/ https://www.ncbi.nlm.nih.gov/pubmed/34764618 http://dx.doi.org/10.1007/s10489-021-02691-x |
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author | Chen, Han Jiang, Yifan Loew, Murray Ko, Hanseok |
author_facet | Chen, Han Jiang, Yifan Loew, Murray Ko, Hanseok |
author_sort | Chen, Han |
collection | PubMed |
description | Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsupervised domain adaptation based segmentation network to improve the segmentation performance of the infection areas in COVID-19 CT images. In particular, we propose to utilize the synthetic data and limited unlabeled real COVID-19 CT images to jointly train the segmentation network. Furthermore, we develop a novel domain adaptation module, which is used to align the two domains and effectively improve the segmentation network’s generalization capability to the real domain. Besides, we propose an unsupervised adversarial training scheme, which encourages the segmentation network to learn the domain-invariant feature, so that the robust feature can be used for segmentation. Experimental results demonstrate that our method can achieve state-of-the-art segmentation performance on COVID-19 CT images. |
format | Online Article Text |
id | pubmed-8421243 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Springer US |
record_format | MEDLINE/PubMed |
spelling | pubmed-84212432021-09-07 Unsupervised domain adaptation based COVID-19 CT infection segmentation network Chen, Han Jiang, Yifan Loew, Murray Ko, Hanseok Appl Intell (Dordr) Article Automatic segmentation of infection areas in computed tomography (CT) images has proven to be an effective diagnostic approach for COVID-19. However, due to the limited number of pixel-level annotated medical images, accurate segmentation remains a major challenge. In this paper, we propose an unsupervised domain adaptation based segmentation network to improve the segmentation performance of the infection areas in COVID-19 CT images. In particular, we propose to utilize the synthetic data and limited unlabeled real COVID-19 CT images to jointly train the segmentation network. Furthermore, we develop a novel domain adaptation module, which is used to align the two domains and effectively improve the segmentation network’s generalization capability to the real domain. Besides, we propose an unsupervised adversarial training scheme, which encourages the segmentation network to learn the domain-invariant feature, so that the robust feature can be used for segmentation. Experimental results demonstrate that our method can achieve state-of-the-art segmentation performance on COVID-19 CT images. Springer US 2021-09-07 2022 /pmc/articles/PMC8421243/ /pubmed/34764618 http://dx.doi.org/10.1007/s10489-021-02691-x Text en © The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature 2021 This article is made available via the PMC Open Access Subset for unrestricted research re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic. |
spellingShingle | Article Chen, Han Jiang, Yifan Loew, Murray Ko, Hanseok Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title | Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title_full | Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title_fullStr | Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title_full_unstemmed | Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title_short | Unsupervised domain adaptation based COVID-19 CT infection segmentation network |
title_sort | unsupervised domain adaptation based covid-19 ct infection segmentation network |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8421243/ https://www.ncbi.nlm.nih.gov/pubmed/34764618 http://dx.doi.org/10.1007/s10489-021-02691-x |
work_keys_str_mv | AT chenhan unsuperviseddomainadaptationbasedcovid19ctinfectionsegmentationnetwork AT jiangyifan unsuperviseddomainadaptationbasedcovid19ctinfectionsegmentationnetwork AT loewmurray unsuperviseddomainadaptationbasedcovid19ctinfectionsegmentationnetwork AT kohanseok unsuperviseddomainadaptationbasedcovid19ctinfectionsegmentationnetwork |