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RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)

Kenaf (Hibiscus cannabinus L.) is an industrial crop used as a raw material in various fields and is cultivated worldwide. Compared to high potential for its utilization, breeding sector is not vigorous partially due to laborous breeding procedure. Thus, efficient breeding methods are required for v...

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Autores principales: Han, Gyung Doeok, Jang, GyuJin, Kim, Jaeyoung, Kim, Dong-Wook, Rodrogues, Renato, Kim, Seong-Hoon, Kim, Hak-Jin, Chung, Yong Suk
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423244/
https://www.ncbi.nlm.nih.gov/pubmed/34492059
http://dx.doi.org/10.1371/journal.pone.0256978
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author Han, Gyung Doeok
Jang, GyuJin
Kim, Jaeyoung
Kim, Dong-Wook
Rodrogues, Renato
Kim, Seong-Hoon
Kim, Hak-Jin
Chung, Yong Suk
author_facet Han, Gyung Doeok
Jang, GyuJin
Kim, Jaeyoung
Kim, Dong-Wook
Rodrogues, Renato
Kim, Seong-Hoon
Kim, Hak-Jin
Chung, Yong Suk
author_sort Han, Gyung Doeok
collection PubMed
description Kenaf (Hibiscus cannabinus L.) is an industrial crop used as a raw material in various fields and is cultivated worldwide. Compared to high potential for its utilization, breeding sector is not vigorous partially due to laborous breeding procedure. Thus, efficient breeding methods are required for varieties that can adapt to various environments and obtain optimal production. For that, identifying kenaf’s characteristics is very important during the breeding process. Here, we investigated if RGB based vegetative index (VI) could be associated with traits for biomass. We used 20 varieties and germplasm of kenaf and RGB images taken with unmanned aerial vehicles (UAVs) for field selection in early and late growth stage. In addition, measuring the stem diameter and the number of nodes confirmed whether the vegetative index value obtained from the RGB image could infer the actual plant biomass. Based on the results, it was confirmed that the individual surface area and estimated plant height, which were identified from the RGB image, had positive correlations with the stem diameter and node number, which are actual growth indicators of the rate of growth further, biomass could also be estimated based on this. Moreover, it is suggested that VIs have a high correlation with actual growth indicators; thus, the biomass of kenaf could be predicted. Interstingly, those traits showing high correlation in the late stage had very low correlations in the early stage. To sum up, the results in the current study suggest a more efficient breeding method by reducing labor and resources required for breeding selection by the use of RGB image analysis obtained by UAV. This means that considerable high-quality research could be performed even with a tight budget. Furthermore, this method could be applied to crop management, which is done with other vegetative indices using a multispectral camera.
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spelling pubmed-84232442021-09-08 RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.) Han, Gyung Doeok Jang, GyuJin Kim, Jaeyoung Kim, Dong-Wook Rodrogues, Renato Kim, Seong-Hoon Kim, Hak-Jin Chung, Yong Suk PLoS One Research Article Kenaf (Hibiscus cannabinus L.) is an industrial crop used as a raw material in various fields and is cultivated worldwide. Compared to high potential for its utilization, breeding sector is not vigorous partially due to laborous breeding procedure. Thus, efficient breeding methods are required for varieties that can adapt to various environments and obtain optimal production. For that, identifying kenaf’s characteristics is very important during the breeding process. Here, we investigated if RGB based vegetative index (VI) could be associated with traits for biomass. We used 20 varieties and germplasm of kenaf and RGB images taken with unmanned aerial vehicles (UAVs) for field selection in early and late growth stage. In addition, measuring the stem diameter and the number of nodes confirmed whether the vegetative index value obtained from the RGB image could infer the actual plant biomass. Based on the results, it was confirmed that the individual surface area and estimated plant height, which were identified from the RGB image, had positive correlations with the stem diameter and node number, which are actual growth indicators of the rate of growth further, biomass could also be estimated based on this. Moreover, it is suggested that VIs have a high correlation with actual growth indicators; thus, the biomass of kenaf could be predicted. Interstingly, those traits showing high correlation in the late stage had very low correlations in the early stage. To sum up, the results in the current study suggest a more efficient breeding method by reducing labor and resources required for breeding selection by the use of RGB image analysis obtained by UAV. This means that considerable high-quality research could be performed even with a tight budget. Furthermore, this method could be applied to crop management, which is done with other vegetative indices using a multispectral camera. Public Library of Science 2021-09-07 /pmc/articles/PMC8423244/ /pubmed/34492059 http://dx.doi.org/10.1371/journal.pone.0256978 Text en © 2021 Han et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Han, Gyung Doeok
Jang, GyuJin
Kim, Jaeyoung
Kim, Dong-Wook
Rodrogues, Renato
Kim, Seong-Hoon
Kim, Hak-Jin
Chung, Yong Suk
RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title_full RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title_fullStr RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title_full_unstemmed RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title_short RGB images-based vegetative index for phenotyping kenaf (Hibiscus cannabinus L.)
title_sort rgb images-based vegetative index for phenotyping kenaf (hibiscus cannabinus l.)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423244/
https://www.ncbi.nlm.nih.gov/pubmed/34492059
http://dx.doi.org/10.1371/journal.pone.0256978
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