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Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer
Survival is low in ovarian cancer (OC). Most OC patients demonstrate advanced metastases, and recurrence is common. Dysregulation of laminin interactions is associated with cancer development. However, it is unknown whether laminin subunits can be considered as biomarkers for OC diagnosis, prognosis...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423899/ https://www.ncbi.nlm.nih.gov/pubmed/34512203 http://dx.doi.org/10.3389/pore.2021.1609855 |
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author | Diao, Bowen Yang, Ping |
author_facet | Diao, Bowen Yang, Ping |
author_sort | Diao, Bowen |
collection | PubMed |
description | Survival is low in ovarian cancer (OC). Most OC patients demonstrate advanced metastases, and recurrence is common. Dysregulation of laminin interactions is associated with cancer development. However, it is unknown whether laminin subunits can be considered as biomarkers for OC diagnosis, prognosis, and treatment. We used cBioPortal, GEO, ONCOMINE, GEPIA, Human Protein Atlas, Kaplan-Meier Plotter, TIMER, and Metascape to determine the associations among laminin expression, prognosis, and immune cell infiltration in OC. LAMA5, LAMB3, and LAMC2 mRNAs and LAMA3, LAMB1/B2/B3, and LAMC1/C2 proteins were overexpressed in OC tissues compared with normal ovaries. LAMA4, LAMB1, and LAMC1 mRNA upregulation was positively correlated with worse overall survival (OS) and progression-free survival (PFS) in OC. Elevated LAMA2 and LAMC2 mRNA expression levels were related to better PFS or OS, respectively. The results speculated that LAMA5 could potentially be a good prognostic factor in OC. Its expression proves valuable for predicting OS in patients diagnosed with stage Ⅳ and grade 3 OC and PFS in patients diagnosed with all OC stages or grades. LAMB3 and LAMC2 expression was correlated with platinum resistance development. ROC analysis of laminins in OC sets revealed that LAMA2/A4/A5, LAMB1/B2/B3, and LAMC2 could be used to differentiate between malignant tumors and non-neoplastic tissues. LAMA1/A5 and LAMC1 were significantly and negatively correlated with various tumor immune infiltrates (TILs), especially with dendritic cells, CD8(+) T cells or neutrophil. LAMA4 and LAMB1 might be associated with tumor purity in OC. Overall, LAMA5 and LAMC1 could help predict OC survival and diagnosis and might be deemed important OC oncogenes. |
format | Online Article Text |
id | pubmed-8423899 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-84238992021-09-09 Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer Diao, Bowen Yang, Ping Pathol Oncol Res Pathology and Oncology Archive Survival is low in ovarian cancer (OC). Most OC patients demonstrate advanced metastases, and recurrence is common. Dysregulation of laminin interactions is associated with cancer development. However, it is unknown whether laminin subunits can be considered as biomarkers for OC diagnosis, prognosis, and treatment. We used cBioPortal, GEO, ONCOMINE, GEPIA, Human Protein Atlas, Kaplan-Meier Plotter, TIMER, and Metascape to determine the associations among laminin expression, prognosis, and immune cell infiltration in OC. LAMA5, LAMB3, and LAMC2 mRNAs and LAMA3, LAMB1/B2/B3, and LAMC1/C2 proteins were overexpressed in OC tissues compared with normal ovaries. LAMA4, LAMB1, and LAMC1 mRNA upregulation was positively correlated with worse overall survival (OS) and progression-free survival (PFS) in OC. Elevated LAMA2 and LAMC2 mRNA expression levels were related to better PFS or OS, respectively. The results speculated that LAMA5 could potentially be a good prognostic factor in OC. Its expression proves valuable for predicting OS in patients diagnosed with stage Ⅳ and grade 3 OC and PFS in patients diagnosed with all OC stages or grades. LAMB3 and LAMC2 expression was correlated with platinum resistance development. ROC analysis of laminins in OC sets revealed that LAMA2/A4/A5, LAMB1/B2/B3, and LAMC2 could be used to differentiate between malignant tumors and non-neoplastic tissues. LAMA1/A5 and LAMC1 were significantly and negatively correlated with various tumor immune infiltrates (TILs), especially with dendritic cells, CD8(+) T cells or neutrophil. LAMA4 and LAMB1 might be associated with tumor purity in OC. Overall, LAMA5 and LAMC1 could help predict OC survival and diagnosis and might be deemed important OC oncogenes. Frontiers Media S.A. 2021-08-25 /pmc/articles/PMC8423899/ /pubmed/34512203 http://dx.doi.org/10.3389/pore.2021.1609855 Text en Copyright © 2021 Diao and Yang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Pathology and Oncology Archive Diao, Bowen Yang, Ping Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title | Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title_full | Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title_fullStr | Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title_full_unstemmed | Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title_short | Comprehensive Analysis of the Expression and Prognosis for Laminin Genes in Ovarian Cancer |
title_sort | comprehensive analysis of the expression and prognosis for laminin genes in ovarian cancer |
topic | Pathology and Oncology Archive |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423899/ https://www.ncbi.nlm.nih.gov/pubmed/34512203 http://dx.doi.org/10.3389/pore.2021.1609855 |
work_keys_str_mv | AT diaobowen comprehensiveanalysisoftheexpressionandprognosisforlaminingenesinovariancancer AT yangping comprehensiveanalysisoftheexpressionandprognosisforlaminingenesinovariancancer |