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Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations

The visualization of dynamic graphs is a challenging task owing to the various properties of the underlying relational data and the additional time-varying property. For sparse and small graphs, the most efficient approach to such visualization is node-link diagrams, whereas for dense graphs with at...

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Autores principales: Burch, Michael, ten Brinke, Kiet Bennema, Castella, Adrien, Peters, Ghassen Karray Sebastiaan, Shteriyanov, Vasil, Vlasvinkel, Rinse
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Singapore 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423958/
https://www.ncbi.nlm.nih.gov/pubmed/34491465
http://dx.doi.org/10.1186/s42492-021-00088-8
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author Burch, Michael
ten Brinke, Kiet Bennema
Castella, Adrien
Peters, Ghassen Karray Sebastiaan
Shteriyanov, Vasil
Vlasvinkel, Rinse
author_facet Burch, Michael
ten Brinke, Kiet Bennema
Castella, Adrien
Peters, Ghassen Karray Sebastiaan
Shteriyanov, Vasil
Vlasvinkel, Rinse
author_sort Burch, Michael
collection PubMed
description The visualization of dynamic graphs is a challenging task owing to the various properties of the underlying relational data and the additional time-varying property. For sparse and small graphs, the most efficient approach to such visualization is node-link diagrams, whereas for dense graphs with attached data, adjacency matrices might be the better choice. Because graphs can contain both properties, being globally sparse and locally dense, a combination of several visual metaphors as well as static and dynamic visualizations is beneficial. In this paper, a visually and algorithmically scalable approach that provides views and perspectives on graphs as interactively linked node-link and adjacency matrix visualizations is described. As the novelty of this technique, insights such as clusters or anomalies from one or several combined views can be used to influence the layout or reordering of the other views. Moreover, the importance of nodes and node groups can be detected, computed, and visualized by considering several layout and reordering properties in combination as well as different edge properties for the same set of nodes. As an additional feature set, an automatic identification of groups, clusters, and outliers is provided over time, and based on the visual outcome of the node-link and matrix visualizations, the repertoire of the supported layout and matrix reordering techniques is extended, and more interaction techniques are provided when considering the dynamics of the graph data. Finally, a small user experiment was conducted to investigate the usability of the proposed approach. The usefulness of the proposed tool is illustrated by applying it to a graph dataset, such as e co-authorships, co-citations, and a Comprehensible Perl Archive Network distribution.
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spelling pubmed-84239582021-09-29 Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations Burch, Michael ten Brinke, Kiet Bennema Castella, Adrien Peters, Ghassen Karray Sebastiaan Shteriyanov, Vasil Vlasvinkel, Rinse Vis Comput Ind Biomed Art Original Article The visualization of dynamic graphs is a challenging task owing to the various properties of the underlying relational data and the additional time-varying property. For sparse and small graphs, the most efficient approach to such visualization is node-link diagrams, whereas for dense graphs with attached data, adjacency matrices might be the better choice. Because graphs can contain both properties, being globally sparse and locally dense, a combination of several visual metaphors as well as static and dynamic visualizations is beneficial. In this paper, a visually and algorithmically scalable approach that provides views and perspectives on graphs as interactively linked node-link and adjacency matrix visualizations is described. As the novelty of this technique, insights such as clusters or anomalies from one or several combined views can be used to influence the layout or reordering of the other views. Moreover, the importance of nodes and node groups can be detected, computed, and visualized by considering several layout and reordering properties in combination as well as different edge properties for the same set of nodes. As an additional feature set, an automatic identification of groups, clusters, and outliers is provided over time, and based on the visual outcome of the node-link and matrix visualizations, the repertoire of the supported layout and matrix reordering techniques is extended, and more interaction techniques are provided when considering the dynamics of the graph data. Finally, a small user experiment was conducted to investigate the usability of the proposed approach. The usefulness of the proposed tool is illustrated by applying it to a graph dataset, such as e co-authorships, co-citations, and a Comprehensible Perl Archive Network distribution. Springer Singapore 2021-09-07 /pmc/articles/PMC8423958/ /pubmed/34491465 http://dx.doi.org/10.1186/s42492-021-00088-8 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Original Article
Burch, Michael
ten Brinke, Kiet Bennema
Castella, Adrien
Peters, Ghassen Karray Sebastiaan
Shteriyanov, Vasil
Vlasvinkel, Rinse
Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title_full Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title_fullStr Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title_full_unstemmed Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title_short Dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
title_sort dynamic graph exploration by interactively linked node-link diagrams and matrix visualizations
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8423958/
https://www.ncbi.nlm.nih.gov/pubmed/34491465
http://dx.doi.org/10.1186/s42492-021-00088-8
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