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Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia
BACKGROUND: To develop a machine learning-based CT radiomics model is critical for the accurate diagnosis of the rapid spreading coronavirus disease 2019 (COVID-19). METHODS: In this retrospective study, a total of 326 chest CT exams from 134 patients (63 confirmed COVID-19 patients and 71 non-COVID...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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BioMed Central
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424152/ https://www.ncbi.nlm.nih.gov/pubmed/34496794 http://dx.doi.org/10.1186/s12879-021-06614-6 |
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author | Chen, Hui Juan Mao, Li Chen, Yang Yuan, Li Wang, Fei Li, Xiuli Cai, Qinlei Qiu, Jie Chen, Feng |
author_facet | Chen, Hui Juan Mao, Li Chen, Yang Yuan, Li Wang, Fei Li, Xiuli Cai, Qinlei Qiu, Jie Chen, Feng |
author_sort | Chen, Hui Juan |
collection | PubMed |
description | BACKGROUND: To develop a machine learning-based CT radiomics model is critical for the accurate diagnosis of the rapid spreading coronavirus disease 2019 (COVID-19). METHODS: In this retrospective study, a total of 326 chest CT exams from 134 patients (63 confirmed COVID-19 patients and 71 non-COVID-19 patients) were collected from January 20 to February 8, 2020. A semi-automatic segmentation procedure was used to delineate the volume of interest (VOI), and radiomic features were extracted. The Support Vector Machine (SVM) model was built on the combination of 4 groups of features, including radiomic features, traditional radiological features, quantifying features, and clinical features. By repeating cross-validation procedure, the performance on the time-independent testing cohort was evaluated by the area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, and specificity. RESULTS: For the SVM model built on the combination of 4 groups of features (integrated model), the per-exam AUC was 0.925 (95% CI 0.856 to 0.994) for differentiating COVID-19 on the testing cohort, and the sensitivity and specificity were 0.816 (95% CI 0.651 to 0.917) and 0.923 (95% CI 0.621 to 0.996), respectively. As for the SVM models built on radiomic features, radiological features, quantifying features, and clinical features, individually, the AUC on the testing cohort reached 0.765, 0.818, 0.607, and 0.739, respectively, significantly lower than the integrated model, except for the radiomic model. CONCLUSION: The machine learning-based CT radiomics models may accurately classify COVID-19, helping clinicians and radiologists to identify COVID-19 positive cases. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12879-021-06614-6. |
format | Online Article Text |
id | pubmed-8424152 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-84241522021-09-08 Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia Chen, Hui Juan Mao, Li Chen, Yang Yuan, Li Wang, Fei Li, Xiuli Cai, Qinlei Qiu, Jie Chen, Feng BMC Infect Dis Research Article BACKGROUND: To develop a machine learning-based CT radiomics model is critical for the accurate diagnosis of the rapid spreading coronavirus disease 2019 (COVID-19). METHODS: In this retrospective study, a total of 326 chest CT exams from 134 patients (63 confirmed COVID-19 patients and 71 non-COVID-19 patients) were collected from January 20 to February 8, 2020. A semi-automatic segmentation procedure was used to delineate the volume of interest (VOI), and radiomic features were extracted. The Support Vector Machine (SVM) model was built on the combination of 4 groups of features, including radiomic features, traditional radiological features, quantifying features, and clinical features. By repeating cross-validation procedure, the performance on the time-independent testing cohort was evaluated by the area under the receiver operating characteristic curve (AUC), accuracy, sensitivity, and specificity. RESULTS: For the SVM model built on the combination of 4 groups of features (integrated model), the per-exam AUC was 0.925 (95% CI 0.856 to 0.994) for differentiating COVID-19 on the testing cohort, and the sensitivity and specificity were 0.816 (95% CI 0.651 to 0.917) and 0.923 (95% CI 0.621 to 0.996), respectively. As for the SVM models built on radiomic features, radiological features, quantifying features, and clinical features, individually, the AUC on the testing cohort reached 0.765, 0.818, 0.607, and 0.739, respectively, significantly lower than the integrated model, except for the radiomic model. CONCLUSION: The machine learning-based CT radiomics models may accurately classify COVID-19, helping clinicians and radiologists to identify COVID-19 positive cases. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1186/s12879-021-06614-6. BioMed Central 2021-09-08 /pmc/articles/PMC8424152/ /pubmed/34496794 http://dx.doi.org/10.1186/s12879-021-06614-6 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research Article Chen, Hui Juan Mao, Li Chen, Yang Yuan, Li Wang, Fei Li, Xiuli Cai, Qinlei Qiu, Jie Chen, Feng Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title | Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title_full | Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title_fullStr | Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title_full_unstemmed | Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title_short | Machine learning-based CT radiomics model distinguishes COVID-19 from non-COVID-19 pneumonia |
title_sort | machine learning-based ct radiomics model distinguishes covid-19 from non-covid-19 pneumonia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424152/ https://www.ncbi.nlm.nih.gov/pubmed/34496794 http://dx.doi.org/10.1186/s12879-021-06614-6 |
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