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Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means

In this work, the partitioning clustering of COVID-19 data using c-Means (cM) and Fuzy c-Means (Fc-M) algorithms is carried out. Based on the data available from January 2020 with respect to location, i.e., longitude and latitude of the globe, the confirmed daily cases, recoveries, and deaths are cl...

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Autores principales: Afzal, Asif, Ansari, Zahid, Alshahrani, Saad, Raj, Arun K., Saheer Kuruniyan, Mohamed, Ahamed Saleel, C., Nisar, Kottakkaran Sooppy
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Author(s). Published by Elsevier B.V. 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424416/
https://www.ncbi.nlm.nih.gov/pubmed/34513577
http://dx.doi.org/10.1016/j.rinp.2021.104639
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author Afzal, Asif
Ansari, Zahid
Alshahrani, Saad
Raj, Arun K.
Saheer Kuruniyan, Mohamed
Ahamed Saleel, C.
Nisar, Kottakkaran Sooppy
author_facet Afzal, Asif
Ansari, Zahid
Alshahrani, Saad
Raj, Arun K.
Saheer Kuruniyan, Mohamed
Ahamed Saleel, C.
Nisar, Kottakkaran Sooppy
author_sort Afzal, Asif
collection PubMed
description In this work, the partitioning clustering of COVID-19 data using c-Means (cM) and Fuzy c-Means (Fc-M) algorithms is carried out. Based on the data available from January 2020 with respect to location, i.e., longitude and latitude of the globe, the confirmed daily cases, recoveries, and deaths are clustered. In the analysis, the maximum cluster size is treated as a variable and is varied from 5 to 50 in both algorithms to find out an optimum number. The performance and validity indices of the clusters formed are analyzed to assess the quality of clusters. The validity indices to understand all the COVID-19 clusters' quality are analysed based on the Zahid SC (Separation Compaction) index, Xie-Beni Index, Fukuyama–Sugeno Index, Validity function, PC (performance coefficient), and CE (entropy) indexes. The analysis results pointed out that five clusters were identified as a major centroid where the pandemic looks concentrated. Additionally, the observations revealed that mainly the pandemic is distributed easily at any global location, and there are several centroids of COVID-19, which primarily act as epicentres. However, the three main COVID-19 clusters identified are 1) cases with value <50,000, 2) cases with a value between 0.1 million to 2 million, and 3) cases above 2 million. These centroids are located in the US, Brazil, and India, where the rest of the small clusters of the pandemic look oriented. Furthermore, the Fc-M technique seems to provide a much better cluster than the c-M algorithm.
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spelling pubmed-84244162021-09-08 Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means Afzal, Asif Ansari, Zahid Alshahrani, Saad Raj, Arun K. Saheer Kuruniyan, Mohamed Ahamed Saleel, C. Nisar, Kottakkaran Sooppy Results Phys Article In this work, the partitioning clustering of COVID-19 data using c-Means (cM) and Fuzy c-Means (Fc-M) algorithms is carried out. Based on the data available from January 2020 with respect to location, i.e., longitude and latitude of the globe, the confirmed daily cases, recoveries, and deaths are clustered. In the analysis, the maximum cluster size is treated as a variable and is varied from 5 to 50 in both algorithms to find out an optimum number. The performance and validity indices of the clusters formed are analyzed to assess the quality of clusters. The validity indices to understand all the COVID-19 clusters' quality are analysed based on the Zahid SC (Separation Compaction) index, Xie-Beni Index, Fukuyama–Sugeno Index, Validity function, PC (performance coefficient), and CE (entropy) indexes. The analysis results pointed out that five clusters were identified as a major centroid where the pandemic looks concentrated. Additionally, the observations revealed that mainly the pandemic is distributed easily at any global location, and there are several centroids of COVID-19, which primarily act as epicentres. However, the three main COVID-19 clusters identified are 1) cases with value <50,000, 2) cases with a value between 0.1 million to 2 million, and 3) cases above 2 million. These centroids are located in the US, Brazil, and India, where the rest of the small clusters of the pandemic look oriented. Furthermore, the Fc-M technique seems to provide a much better cluster than the c-M algorithm. The Author(s). Published by Elsevier B.V. 2021-10 2021-08-21 /pmc/articles/PMC8424416/ /pubmed/34513577 http://dx.doi.org/10.1016/j.rinp.2021.104639 Text en © 2021 The Author(s) Since January 2020 Elsevier has created a COVID-19 resource centre with free information in English and Mandarin on the novel coronavirus COVID-19. The COVID-19 resource centre is hosted on Elsevier Connect, the company's public news and information website. Elsevier hereby grants permission to make all its COVID-19-related research that is available on the COVID-19 resource centre - including this research content - immediately available in PubMed Central and other publicly funded repositories, such as the WHO COVID database with rights for unrestricted research re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for free by Elsevier for as long as the COVID-19 resource centre remains active.
spellingShingle Article
Afzal, Asif
Ansari, Zahid
Alshahrani, Saad
Raj, Arun K.
Saheer Kuruniyan, Mohamed
Ahamed Saleel, C.
Nisar, Kottakkaran Sooppy
Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title_full Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title_fullStr Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title_full_unstemmed Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title_short Clustering of COVID-19 data for knowledge discovery using c-means and fuzzy c-means
title_sort clustering of covid-19 data for knowledge discovery using c-means and fuzzy c-means
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8424416/
https://www.ncbi.nlm.nih.gov/pubmed/34513577
http://dx.doi.org/10.1016/j.rinp.2021.104639
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