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Glioblastoma signature in the DNA of blood-derived cells
Current approach for the detection of cancer is based on identifying genetic mutations typical to tumor cells. This approach is effective only when cancer has already emerged, however, it might be in a stage too advanced for effective treatment. Cancer is caused by the continuous accumulation of mut...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425531/ https://www.ncbi.nlm.nih.gov/pubmed/34495981 http://dx.doi.org/10.1371/journal.pone.0256831 |
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author | Jain, Siddharth Mazaheri, Bijan Raviv, Netanel Bruck, Jehoshua |
author_facet | Jain, Siddharth Mazaheri, Bijan Raviv, Netanel Bruck, Jehoshua |
author_sort | Jain, Siddharth |
collection | PubMed |
description | Current approach for the detection of cancer is based on identifying genetic mutations typical to tumor cells. This approach is effective only when cancer has already emerged, however, it might be in a stage too advanced for effective treatment. Cancer is caused by the continuous accumulation of mutations; is it possible to measure the time-dependent information of mutation accumulation and predict the emergence of cancer? We hypothesize that the mutation history derived from the tandem repeat regions in blood-derived DNA carries information about the accumulation of the cancer driver mutations in other tissues. To validate our hypothesis, we computed the mutation histories from the tandem repeat regions in blood-derived exomic DNA of 3874 TCGA patients with different cancer types and found a statistically significant signal with specificity ranging from 66% to 93% differentiating Glioblastoma patients from other cancer patients. Our approach and findings offer a new direction for future cancer prediction and early cancer detection based on information derived from blood-derived DNA. |
format | Online Article Text |
id | pubmed-8425531 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-84255312021-09-09 Glioblastoma signature in the DNA of blood-derived cells Jain, Siddharth Mazaheri, Bijan Raviv, Netanel Bruck, Jehoshua PLoS One Research Article Current approach for the detection of cancer is based on identifying genetic mutations typical to tumor cells. This approach is effective only when cancer has already emerged, however, it might be in a stage too advanced for effective treatment. Cancer is caused by the continuous accumulation of mutations; is it possible to measure the time-dependent information of mutation accumulation and predict the emergence of cancer? We hypothesize that the mutation history derived from the tandem repeat regions in blood-derived DNA carries information about the accumulation of the cancer driver mutations in other tissues. To validate our hypothesis, we computed the mutation histories from the tandem repeat regions in blood-derived exomic DNA of 3874 TCGA patients with different cancer types and found a statistically significant signal with specificity ranging from 66% to 93% differentiating Glioblastoma patients from other cancer patients. Our approach and findings offer a new direction for future cancer prediction and early cancer detection based on information derived from blood-derived DNA. Public Library of Science 2021-09-08 /pmc/articles/PMC8425531/ /pubmed/34495981 http://dx.doi.org/10.1371/journal.pone.0256831 Text en © 2021 Jain et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Jain, Siddharth Mazaheri, Bijan Raviv, Netanel Bruck, Jehoshua Glioblastoma signature in the DNA of blood-derived cells |
title | Glioblastoma signature in the DNA of blood-derived cells |
title_full | Glioblastoma signature in the DNA of blood-derived cells |
title_fullStr | Glioblastoma signature in the DNA of blood-derived cells |
title_full_unstemmed | Glioblastoma signature in the DNA of blood-derived cells |
title_short | Glioblastoma signature in the DNA of blood-derived cells |
title_sort | glioblastoma signature in the dna of blood-derived cells |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425531/ https://www.ncbi.nlm.nih.gov/pubmed/34495981 http://dx.doi.org/10.1371/journal.pone.0256831 |
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