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The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)

Arundo formosana Hack. belongs to the Arundionideae subfamily of Poaceae. In this study, we sequenced and assembled the complete chloroplast genome of A. formosana. The complete chloroplast genome was 136,919 bp in size, including a large single copy region of 82,039 bp, a small single-copy region o...

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Detalles Bibliográficos
Autores principales: Feng, Li-Ying, Shi, Chao, Gao, Li-Zhi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425696/
https://www.ncbi.nlm.nih.gov/pubmed/34514139
http://dx.doi.org/10.1080/23802359.2021.1972865
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author Feng, Li-Ying
Shi, Chao
Gao, Li-Zhi
author_facet Feng, Li-Ying
Shi, Chao
Gao, Li-Zhi
author_sort Feng, Li-Ying
collection PubMed
description Arundo formosana Hack. belongs to the Arundionideae subfamily of Poaceae. In this study, we sequenced and assembled the complete chloroplast genome of A. formosana. The complete chloroplast genome was 136,919 bp in size, including a large single copy region of 82,039 bp, a small single-copy region of 12,108 bp and a pair of reverse repeats of 21,386 bp in size. The annotation of A. formosana indicates that it contained 81 protein-coding genes, 47 tRNA and 8 rRNA. Our phylogenetic analysis of the 36 grass complete chroloplast genomes of protein-coding genes using Cyperus rotundus as outgroup showed that A. formosana is closely related to Crinipes species to form the Arundionideae lineage of the grass family.
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spelling pubmed-84256962021-09-09 The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae) Feng, Li-Ying Shi, Chao Gao, Li-Zhi Mitochondrial DNA B Resour Mitogenome Announcement Arundo formosana Hack. belongs to the Arundionideae subfamily of Poaceae. In this study, we sequenced and assembled the complete chloroplast genome of A. formosana. The complete chloroplast genome was 136,919 bp in size, including a large single copy region of 82,039 bp, a small single-copy region of 12,108 bp and a pair of reverse repeats of 21,386 bp in size. The annotation of A. formosana indicates that it contained 81 protein-coding genes, 47 tRNA and 8 rRNA. Our phylogenetic analysis of the 36 grass complete chroloplast genomes of protein-coding genes using Cyperus rotundus as outgroup showed that A. formosana is closely related to Crinipes species to form the Arundionideae lineage of the grass family. Taylor & Francis 2021-08-31 /pmc/articles/PMC8425696/ /pubmed/34514139 http://dx.doi.org/10.1080/23802359.2021.1972865 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Feng, Li-Ying
Shi, Chao
Gao, Li-Zhi
The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title_full The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title_fullStr The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title_full_unstemmed The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title_short The complete chloroplast genome sequence of Arundo formosana Hack. (Poaceae)
title_sort complete chloroplast genome sequence of arundo formosana hack. (poaceae)
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425696/
https://www.ncbi.nlm.nih.gov/pubmed/34514139
http://dx.doi.org/10.1080/23802359.2021.1972865
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