Cargando…

The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing

The complete mitochondrial genome of the fine flounder Paralichthys adspersus, was determined for the first time through Next Generation Sequencing (NGS) approach. The mitogenome (GenBank accession no. MW288827) has 17,060 bp in length and consisted of the well-known 13 protein-coding genes, 22 tRNA...

Descripción completa

Detalles Bibliográficos
Autores principales: Marín, Alan, López-Landavery, Edgar, González-Martinez, Sophia, Reyes-Flores, Lorenzo E., Corona-Herrera, Guillermo, Tapia-Morales, Sandra, Yzásiga-Barrera, Carmen G., Fernandino, Juan I., Zelada-Mázmela, Eliana
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425720/
https://www.ncbi.nlm.nih.gov/pubmed/34514126
http://dx.doi.org/10.1080/23802359.2021.1914217
_version_ 1783749892853727232
author Marín, Alan
López-Landavery, Edgar
González-Martinez, Sophia
Reyes-Flores, Lorenzo E.
Corona-Herrera, Guillermo
Tapia-Morales, Sandra
Yzásiga-Barrera, Carmen G.
Fernandino, Juan I.
Zelada-Mázmela, Eliana
author_facet Marín, Alan
López-Landavery, Edgar
González-Martinez, Sophia
Reyes-Flores, Lorenzo E.
Corona-Herrera, Guillermo
Tapia-Morales, Sandra
Yzásiga-Barrera, Carmen G.
Fernandino, Juan I.
Zelada-Mázmela, Eliana
author_sort Marín, Alan
collection PubMed
description The complete mitochondrial genome of the fine flounder Paralichthys adspersus, was determined for the first time through Next Generation Sequencing (NGS) approach. The mitogenome (GenBank accession no. MW288827) has 17,060 bp in length and consisted of the well-known 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and the control region. The overall nucleotide composition of the whole mitogenome was A: 27.5%, C: 29.5%, G: 17.1%, and T: 25.9%. Phylogenetic analyses based on 12 protein-coding genes clustered P. adspersus in the monophyletic Paralichthyidae clade, showing the closest phylogenetic relationship with its congeneric species P. olivaceus.
format Online
Article
Text
id pubmed-8425720
institution National Center for Biotechnology Information
language English
publishDate 2021
publisher Taylor & Francis
record_format MEDLINE/PubMed
spelling pubmed-84257202021-09-09 The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing Marín, Alan López-Landavery, Edgar González-Martinez, Sophia Reyes-Flores, Lorenzo E. Corona-Herrera, Guillermo Tapia-Morales, Sandra Yzásiga-Barrera, Carmen G. Fernandino, Juan I. Zelada-Mázmela, Eliana Mitochondrial DNA B Resour Mitogenome Announcement The complete mitochondrial genome of the fine flounder Paralichthys adspersus, was determined for the first time through Next Generation Sequencing (NGS) approach. The mitogenome (GenBank accession no. MW288827) has 17,060 bp in length and consisted of the well-known 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and the control region. The overall nucleotide composition of the whole mitogenome was A: 27.5%, C: 29.5%, G: 17.1%, and T: 25.9%. Phylogenetic analyses based on 12 protein-coding genes clustered P. adspersus in the monophyletic Paralichthyidae clade, showing the closest phylogenetic relationship with its congeneric species P. olivaceus. Taylor & Francis 2021-08-31 /pmc/articles/PMC8425720/ /pubmed/34514126 http://dx.doi.org/10.1080/23802359.2021.1914217 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Marín, Alan
López-Landavery, Edgar
González-Martinez, Sophia
Reyes-Flores, Lorenzo E.
Corona-Herrera, Guillermo
Tapia-Morales, Sandra
Yzásiga-Barrera, Carmen G.
Fernandino, Juan I.
Zelada-Mázmela, Eliana
The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title_full The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title_fullStr The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title_full_unstemmed The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title_short The complete mitochondrial genome of the fine flounder Paralichthys adspersus revealed by next-generation sequencing
title_sort complete mitochondrial genome of the fine flounder paralichthys adspersus revealed by next-generation sequencing
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425720/
https://www.ncbi.nlm.nih.gov/pubmed/34514126
http://dx.doi.org/10.1080/23802359.2021.1914217
work_keys_str_mv AT marinalan thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT lopezlandaveryedgar thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT gonzalezmartinezsophia thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT reyesfloreslorenzoe thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT coronaherreraguillermo thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT tapiamoralessandra thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT yzasigabarreracarmeng thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT fernandinojuani thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT zeladamazmelaeliana thecompletemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT marinalan completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT lopezlandaveryedgar completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT gonzalezmartinezsophia completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT reyesfloreslorenzoe completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT coronaherreraguillermo completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT tapiamoralessandra completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT yzasigabarreracarmeng completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT fernandinojuani completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing
AT zeladamazmelaeliana completemitochondrialgenomeofthefineflounderparalichthysadspersusrevealedbynextgenerationsequencing