The complete chloroplast genome of the national tree of Peru, quina (Cinchona officinalis L., Rubiaceae)

Here, we report the first complete chloroplast (cp) genome of Cinchona officinalis. This cp genome has a 156,984 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (83,929 bp) and an 18,051 bp small single-copy (SSC) region, separated by two inverted repea...

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Detalles Bibliográficos
Autores principales: Arbizu, Carlos I., Ferro-Mauricio, Rubén D., Chávez-Galarza, Julio C., Guerrero-Abad, Juan Carlos, Vásquez, Héctor V., Maicelo, Jorge L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
MitoGenome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425725/
https://www.ncbi.nlm.nih.gov/pubmed/34514158
http://dx.doi.org/10.1080/23802359.2021.1969697
Descripción
Sumario:Here, we report the first complete chloroplast (cp) genome of Cinchona officinalis. This cp genome has a 156,984 bp in length with typical quadripartite structure, containing a large single copy (LSC) region (83,929 bp) and an 18,051 bp small single-copy (SSC) region, separated by two inverted repeat (IR) regions (27,502 bp). The total GC content was 37.75%. Quina tree chloroplast genome possesses 135 genes that consisted of 89 protein-coding genes, 37 tRNA, eight rRNA, and one pseudogene. Phylogenetic analysis showed that C. officinalis is sister to C. pubescens and sister to them is Isertia laevis; all belong to the Cinchonoideae sub-family.

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