Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus

In this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic...

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Detalles Bibliográficos
Autores principales: Chen, Xiaoying, Sun, Yuping, Zhao, Hongxia, Hu, Junru, Chen, Bing, Li, Huo, Huang, Wen
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Mitogenome Announcements
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425741/
https://www.ncbi.nlm.nih.gov/pubmed/34514127
http://dx.doi.org/10.1080/23802359.2021.1967218
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author Chen, Xiaoying
Sun, Yuping
Zhao, Hongxia
Hu, Junru
Chen, Bing
Li, Huo
Huang, Wen
author_facet Chen, Xiaoying
Sun, Yuping
Zhao, Hongxia
Hu, Junru
Chen, Bing
Li, Huo
Huang, Wen
author_sort Chen, Xiaoying
collection PubMed
description In this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic position of S. chloronotus, we analyzed all mitochondrial protein-coding genes from 27 species within the Echinodermata. The results showed that S. chloronotus belonged to the family Stichopodidae and was more closely related to tropical Stichopus species (S. horrens and S. monotuberculatus) than to other species. Our results will be useful for evolutionary analysis of sea cucumber species.
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spelling pubmed-84257412021-09-09 Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus Chen, Xiaoying Sun, Yuping Zhao, Hongxia Hu, Junru Chen, Bing Li, Huo Huang, Wen Mitochondrial DNA B Resour Mitogenome Announcements In this study, we report the complete mitochondrial genome of Stichopus chloronotus. The mitogenome was 16,247 base pairs (58.55% A + T content) in length, comprising a total of 37 genes, including 13 protein-coding genes, 22 transfer RNA genes and 2 ribosomal RNA genes. To resolve the phylogenetic position of S. chloronotus, we analyzed all mitochondrial protein-coding genes from 27 species within the Echinodermata. The results showed that S. chloronotus belonged to the family Stichopodidae and was more closely related to tropical Stichopus species (S. horrens and S. monotuberculatus) than to other species. Our results will be useful for evolutionary analysis of sea cucumber species. Taylor & Francis 2021-08-31 /pmc/articles/PMC8425741/ /pubmed/34514127 http://dx.doi.org/10.1080/23802359.2021.1967218 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcements
Chen, Xiaoying
Sun, Yuping
Zhao, Hongxia
Hu, Junru
Chen, Bing
Li, Huo
Huang, Wen
Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title_full Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title_fullStr Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title_full_unstemmed Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title_short Complete mitochondrial genome of a tropical sea cucumber, Stichopus chloronotus
title_sort complete mitochondrial genome of a tropical sea cucumber, stichopus chloronotus
topic Mitogenome Announcements
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425741/
https://www.ncbi.nlm.nih.gov/pubmed/34514127
http://dx.doi.org/10.1080/23802359.2021.1967218
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