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The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant

Callicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed...

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Autores principales: Gu, Chunjiao, Zhang, Qiang, Zhang, Deng, Zhang, Yancheng, Liang, Junsong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425756/
https://www.ncbi.nlm.nih.gov/pubmed/34514157
http://dx.doi.org/10.1080/23802359.2021.1969696
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author Gu, Chunjiao
Zhang, Qiang
Zhang, Deng
Zhang, Yancheng
Liang, Junsong
author_facet Gu, Chunjiao
Zhang, Qiang
Zhang, Deng
Zhang, Yancheng
Liang, Junsong
author_sort Gu, Chunjiao
collection PubMed
description Callicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed in the chloroplast genome of C. integerrima var. chinensis which was 154179 bp in length, including a pair of inverted repeat (IR) regions (each 51396 bp) separated by a large single-copy region (LSC) of 84927 bp and a small single-copy region (SSC) of 17856 bp, and the overall GC contents of the chloroplast genome was 38.08%. Additionally, we annotated 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was adopted which confirmed the position of C. integerrima var. chinensis was close to the congeneric C. formosana and C. siongsaiensis.
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spelling pubmed-84257562021-09-09 The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant Gu, Chunjiao Zhang, Qiang Zhang, Deng Zhang, Yancheng Liang, Junsong Mitochondrial DNA B Resour Mitogenome Announcement Callicarpa integerrima var. chinensis is one of the traditional medical herbs which has the potential for multiple diseases’ treatment. In this study, the complete chloroplast genome sequence of C. integerrima var. chinensis was sequenced and assembled. A typical quadripartite structure was observed in the chloroplast genome of C. integerrima var. chinensis which was 154179 bp in length, including a pair of inverted repeat (IR) regions (each 51396 bp) separated by a large single-copy region (LSC) of 84927 bp and a small single-copy region (SSC) of 17856 bp, and the overall GC contents of the chloroplast genome was 38.08%. Additionally, we annotated 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis was adopted which confirmed the position of C. integerrima var. chinensis was close to the congeneric C. formosana and C. siongsaiensis. Taylor & Francis 2021-08-27 /pmc/articles/PMC8425756/ /pubmed/34514157 http://dx.doi.org/10.1080/23802359.2021.1969696 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gu, Chunjiao
Zhang, Qiang
Zhang, Deng
Zhang, Yancheng
Liang, Junsong
The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title_full The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title_fullStr The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title_full_unstemmed The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title_short The complete chloroplast genome of Callicarpa integerrima var. chinensis (Lamiaceae) from Guilin, China, a potential medicinal plant
title_sort complete chloroplast genome of callicarpa integerrima var. chinensis (lamiaceae) from guilin, china, a potential medicinal plant
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425756/
https://www.ncbi.nlm.nih.gov/pubmed/34514157
http://dx.doi.org/10.1080/23802359.2021.1969696
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