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The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China

The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The...

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Autores principales: Gao, Yong, Yin, Si, Zhu, Lei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425760/
https://www.ncbi.nlm.nih.gov/pubmed/34514155
http://dx.doi.org/10.1080/23802359.2021.1972483
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author Gao, Yong
Yin, Si
Zhu, Lei
author_facet Gao, Yong
Yin, Si
Zhu, Lei
author_sort Gao, Yong
collection PubMed
description The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The mitogenome of D. chrysorrheum (GenBank accession number, MW629121) has a length of 16,818 bp, with a nucleotide composition of 30.62% A, 23.45% T, 31.34% C, and 14.59% G. The genome is comprised of 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The total length of the protein-coding genes is 11,402 bp, accounting for 67.8% of the total length of the mitochondrial genome. Of the 13 protein-coding genes, 10 have ATG start codons and three genes terminate with incomplete stop codons. A maximum-likelihood phylogenetic tree of 16 bird species placed D. chrysorrheum and D. agile as sister to the other three Dicaeum species (D. concolor, D. eximium and D. cruentatum). This new mitogenome will be useful for further phylogenetic studies of the genus Dicaeum.
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spelling pubmed-84257602021-09-09 The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China Gao, Yong Yin, Si Zhu, Lei Mitochondrial DNA B Resour Mitogenome Announcement The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The mitogenome of D. chrysorrheum (GenBank accession number, MW629121) has a length of 16,818 bp, with a nucleotide composition of 30.62% A, 23.45% T, 31.34% C, and 14.59% G. The genome is comprised of 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The total length of the protein-coding genes is 11,402 bp, accounting for 67.8% of the total length of the mitochondrial genome. Of the 13 protein-coding genes, 10 have ATG start codons and three genes terminate with incomplete stop codons. A maximum-likelihood phylogenetic tree of 16 bird species placed D. chrysorrheum and D. agile as sister to the other three Dicaeum species (D. concolor, D. eximium and D. cruentatum). This new mitogenome will be useful for further phylogenetic studies of the genus Dicaeum. Taylor & Francis 2021-09-06 /pmc/articles/PMC8425760/ /pubmed/34514155 http://dx.doi.org/10.1080/23802359.2021.1972483 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Mitogenome Announcement
Gao, Yong
Yin, Si
Zhu, Lei
The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title_full The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title_fullStr The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title_full_unstemmed The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title_short The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
title_sort mitochondrial genome of the yellow-vented flowerpecker, dicaeum chrysorrheum (dicaeidae) from southwestern china
topic Mitogenome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425760/
https://www.ncbi.nlm.nih.gov/pubmed/34514155
http://dx.doi.org/10.1080/23802359.2021.1972483
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