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The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China
The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Taylor & Francis
2021
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425760/ https://www.ncbi.nlm.nih.gov/pubmed/34514155 http://dx.doi.org/10.1080/23802359.2021.1972483 |
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author | Gao, Yong Yin, Si Zhu, Lei |
author_facet | Gao, Yong Yin, Si Zhu, Lei |
author_sort | Gao, Yong |
collection | PubMed |
description | The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The mitogenome of D. chrysorrheum (GenBank accession number, MW629121) has a length of 16,818 bp, with a nucleotide composition of 30.62% A, 23.45% T, 31.34% C, and 14.59% G. The genome is comprised of 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The total length of the protein-coding genes is 11,402 bp, accounting for 67.8% of the total length of the mitochondrial genome. Of the 13 protein-coding genes, 10 have ATG start codons and three genes terminate with incomplete stop codons. A maximum-likelihood phylogenetic tree of 16 bird species placed D. chrysorrheum and D. agile as sister to the other three Dicaeum species (D. concolor, D. eximium and D. cruentatum). This new mitogenome will be useful for further phylogenetic studies of the genus Dicaeum. |
format | Online Article Text |
id | pubmed-8425760 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Taylor & Francis |
record_format | MEDLINE/PubMed |
spelling | pubmed-84257602021-09-09 The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China Gao, Yong Yin, Si Zhu, Lei Mitochondrial DNA B Resour Mitogenome Announcement The yellow-vented flowerpecker (Dicaeum chrysorrheum Temminck & Laugier) is a small bird in the Dicaeidae family. To explore the phylogenetic relationships within the genus Dicaeum, we sequenced the complete mitochondrial genome of D. chrysorrheum using a next generation sequencing platform. The mitogenome of D. chrysorrheum (GenBank accession number, MW629121) has a length of 16,818 bp, with a nucleotide composition of 30.62% A, 23.45% T, 31.34% C, and 14.59% G. The genome is comprised of 13 protein-coding genes, 22 transfer RNA genes, and two ribosomal RNA genes. The total length of the protein-coding genes is 11,402 bp, accounting for 67.8% of the total length of the mitochondrial genome. Of the 13 protein-coding genes, 10 have ATG start codons and three genes terminate with incomplete stop codons. A maximum-likelihood phylogenetic tree of 16 bird species placed D. chrysorrheum and D. agile as sister to the other three Dicaeum species (D. concolor, D. eximium and D. cruentatum). This new mitogenome will be useful for further phylogenetic studies of the genus Dicaeum. Taylor & Francis 2021-09-06 /pmc/articles/PMC8425760/ /pubmed/34514155 http://dx.doi.org/10.1080/23802359.2021.1972483 Text en © 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Mitogenome Announcement Gao, Yong Yin, Si Zhu, Lei The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title | The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title_full | The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title_fullStr | The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title_full_unstemmed | The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title_short | The mitochondrial genome of the yellow-vented flowerpecker, Dicaeum chrysorrheum (Dicaeidae) from southwestern China |
title_sort | mitochondrial genome of the yellow-vented flowerpecker, dicaeum chrysorrheum (dicaeidae) from southwestern china |
topic | Mitogenome Announcement |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8425760/ https://www.ncbi.nlm.nih.gov/pubmed/34514155 http://dx.doi.org/10.1080/23802359.2021.1972483 |
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