Cargando…
Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease
OBJECTIVE: Increasing evidence emphasizes the implications of dysregulated apoptosis and autophagy cellular processes in coronary artery disease (CAD). Herein, we aimed to explore apoptosis- and autophagy-related long noncoding RNAs (lncRNAs) in peripheral blood of CAD patients. METHODS: The mRNA an...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2021
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8426068/ https://www.ncbi.nlm.nih.gov/pubmed/34513991 http://dx.doi.org/10.1155/2021/5517786 |
_version_ | 1783749966880047104 |
---|---|
author | Zhang, Lijiao Lou, Dayuan He, Dan Wang, Ying Wu, Yuhang Cao, Xinyang Qu, Peng |
author_facet | Zhang, Lijiao Lou, Dayuan He, Dan Wang, Ying Wu, Yuhang Cao, Xinyang Qu, Peng |
author_sort | Zhang, Lijiao |
collection | PubMed |
description | OBJECTIVE: Increasing evidence emphasizes the implications of dysregulated apoptosis and autophagy cellular processes in coronary artery disease (CAD). Herein, we aimed to explore apoptosis- and autophagy-related long noncoding RNAs (lncRNAs) in peripheral blood of CAD patients. METHODS: The mRNA and lncRNA expression profiles were retrieved from the Gene Expression Omnibus (GEO) database. With ∣fold change | >1.5 and adjusted p value < 0.05, differentially expressed apoptosis- and autophagy-related mRNAs were screened between CAD and healthy blood samples. Also, differentially expressed lncRNAs were identified for CAD. Using the psych package, apoptosis- and autophagy-related lncRNAs were defined with Spearson's correlation analysis. Receiver operating characteristic (ROC) curves were conducted for the assessment of the diagnosed efficacy of these apoptosis- and autophagy-related lncRNAs. RESULTS: Our results showed that 24 apoptosis- and autophagy-related mRNAs were abnormally expressed in CAD than normal controls. 12 circulating upregulated and 1 downregulated apoptosis- and autophagy-related lncRNAs were identified for CAD. The ROCs confirmed that AC004485.3 (AUC = 0.899), AC004920.3 (AUC = 0.93), AJ006998.2 (AUC = 0.776), H19 (AUC = 0.943), RP5-902P8.10 (AUC = 0.956), RP5-1114G22.2 (AUC = 0.883), RP11-247A12.1 (AUC = 0.885), RP11-288L9.4 (AUC = 0.928), RP11-344B5.2 (AUC = 0.858), RP11-452C8.1 (AUC = 0.929), RP11-565A3.1 (AUC = 0.893), and XXbac-B33L19.4 (AUC = 0.932) exhibited good performance in differentiating CAD from healthy controls. CONCLUSION: Collectively, our findings proposed that circulating apoptosis- and autophagy-related lncRNAs could become underlying diagnostic markers for CAD in clinical practice. |
format | Online Article Text |
id | pubmed-8426068 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-84260682021-09-09 Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease Zhang, Lijiao Lou, Dayuan He, Dan Wang, Ying Wu, Yuhang Cao, Xinyang Qu, Peng Biomed Res Int Research Article OBJECTIVE: Increasing evidence emphasizes the implications of dysregulated apoptosis and autophagy cellular processes in coronary artery disease (CAD). Herein, we aimed to explore apoptosis- and autophagy-related long noncoding RNAs (lncRNAs) in peripheral blood of CAD patients. METHODS: The mRNA and lncRNA expression profiles were retrieved from the Gene Expression Omnibus (GEO) database. With ∣fold change | >1.5 and adjusted p value < 0.05, differentially expressed apoptosis- and autophagy-related mRNAs were screened between CAD and healthy blood samples. Also, differentially expressed lncRNAs were identified for CAD. Using the psych package, apoptosis- and autophagy-related lncRNAs were defined with Spearson's correlation analysis. Receiver operating characteristic (ROC) curves were conducted for the assessment of the diagnosed efficacy of these apoptosis- and autophagy-related lncRNAs. RESULTS: Our results showed that 24 apoptosis- and autophagy-related mRNAs were abnormally expressed in CAD than normal controls. 12 circulating upregulated and 1 downregulated apoptosis- and autophagy-related lncRNAs were identified for CAD. The ROCs confirmed that AC004485.3 (AUC = 0.899), AC004920.3 (AUC = 0.93), AJ006998.2 (AUC = 0.776), H19 (AUC = 0.943), RP5-902P8.10 (AUC = 0.956), RP5-1114G22.2 (AUC = 0.883), RP11-247A12.1 (AUC = 0.885), RP11-288L9.4 (AUC = 0.928), RP11-344B5.2 (AUC = 0.858), RP11-452C8.1 (AUC = 0.929), RP11-565A3.1 (AUC = 0.893), and XXbac-B33L19.4 (AUC = 0.932) exhibited good performance in differentiating CAD from healthy controls. CONCLUSION: Collectively, our findings proposed that circulating apoptosis- and autophagy-related lncRNAs could become underlying diagnostic markers for CAD in clinical practice. Hindawi 2021-08-31 /pmc/articles/PMC8426068/ /pubmed/34513991 http://dx.doi.org/10.1155/2021/5517786 Text en Copyright © 2021 Lijiao Zhang et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Zhang, Lijiao Lou, Dayuan He, Dan Wang, Ying Wu, Yuhang Cao, Xinyang Qu, Peng Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title | Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title_full | Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title_fullStr | Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title_full_unstemmed | Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title_short | Dysregulated Circulating Apoptosis- and Autophagy-Related lncRNAs as Diagnostic Markers in Coronary Artery Disease |
title_sort | dysregulated circulating apoptosis- and autophagy-related lncrnas as diagnostic markers in coronary artery disease |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8426068/ https://www.ncbi.nlm.nih.gov/pubmed/34513991 http://dx.doi.org/10.1155/2021/5517786 |
work_keys_str_mv | AT zhanglijiao dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT loudayuan dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT hedan dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT wangying dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT wuyuhang dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT caoxinyang dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease AT qupeng dysregulatedcirculatingapoptosisandautophagyrelatedlncrnasasdiagnosticmarkersincoronaryarterydisease |