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Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome
BACKGROUND: We investigate whether deep learning (DL) neural networks can reduce erroneous human “judgment calls” on bedside echocardiograms and help distinguish Takotsubo syndrome (TTS) from anterior wall ST segment elevation myocardial infarction (STEMI). METHODS: We developed a single-channel (DC...
Autores principales: | , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2021
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8426197/ https://www.ncbi.nlm.nih.gov/pubmed/34522872 http://dx.doi.org/10.1016/j.eclinm.2021.101115 |
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author | Zaman, Fahim Ponnapureddy, Rakesh Wang, Yi Grace Chang, Amanda Cadaret, Linda M Abdelhamid, Ahmed Roy, Shubha D Makan, Majesh Zhou, Ruihai Jayanna, Manju B Gnall, Eric Dai, Xuming Singh, Avneet Zheng, Jingsheng Boppana, Venkata S Wang, Feng Singh, Pahul Wu, Xiaodong Liu, Kan |
author_facet | Zaman, Fahim Ponnapureddy, Rakesh Wang, Yi Grace Chang, Amanda Cadaret, Linda M Abdelhamid, Ahmed Roy, Shubha D Makan, Majesh Zhou, Ruihai Jayanna, Manju B Gnall, Eric Dai, Xuming Singh, Avneet Zheng, Jingsheng Boppana, Venkata S Wang, Feng Singh, Pahul Wu, Xiaodong Liu, Kan |
author_sort | Zaman, Fahim |
collection | PubMed |
description | BACKGROUND: We investigate whether deep learning (DL) neural networks can reduce erroneous human “judgment calls” on bedside echocardiograms and help distinguish Takotsubo syndrome (TTS) from anterior wall ST segment elevation myocardial infarction (STEMI). METHODS: We developed a single-channel (DCNN[2D SCI]), a multi-channel (DCNN[2D MCI]), and a 3-dimensional (DCNN[2D+t]) deep convolution neural network, and a recurrent neural network (RNN) based on 17,280 still-frame images and 540 videos from 2-dimensional echocardiograms in 10 years (1 January 2008 to 1 January 2018) retrospective cohort in University of Iowa (UI) and eight other medical centers. Echocardiograms from 450 UI patients were randomly divided into training and testing sets for internal training, testing, and model construction. Echocardiograms of 90 patients from the other medical centers were used for external validation to evaluate the model generalizability. A total of 49 board-certified human readers performed human-side classification on the same echocardiography dataset to compare the diagnostic performance and help data visualization. FINDINGS: The DCNN (2D SCI), DCNN (2D MCI), DCNN(2D+t), and RNN models established based on UI dataset for TTS versus STEMI prediction showed mean diagnostic accuracy 73%, 75%, 80%, and 75% respectively, and mean diagnostic accuracy of 74%, 74%, 77%, and 73%, respectively, on the external validation. DCNN(2D+t) (area under the curve [AUC] 0·787 vs. 0·699, P = 0·015) and RNN models (AUC 0·774 vs. 0·699, P = 0·033) outperformed human readers in differentiating TTS and STEMI by reducing human erroneous judgement calls on TTS. INTERPRETATION: Spatio-temporal hybrid DL neural networks reduce erroneous human “judgement calls” in distinguishing TTS from anterior wall STEMI based on bedside echocardiographic videos. FUNDING: University of Iowa Obermann Center for Advanced Studies Interdisciplinary Research Grant, and Institute for Clinical and Translational Science Grant. National Institutes of Health Award (1R01EB025018–01). |
format | Online Article Text |
id | pubmed-8426197 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2021 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-84261972021-09-13 Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome Zaman, Fahim Ponnapureddy, Rakesh Wang, Yi Grace Chang, Amanda Cadaret, Linda M Abdelhamid, Ahmed Roy, Shubha D Makan, Majesh Zhou, Ruihai Jayanna, Manju B Gnall, Eric Dai, Xuming Singh, Avneet Zheng, Jingsheng Boppana, Venkata S Wang, Feng Singh, Pahul Wu, Xiaodong Liu, Kan EClinicalMedicine Research Paper BACKGROUND: We investigate whether deep learning (DL) neural networks can reduce erroneous human “judgment calls” on bedside echocardiograms and help distinguish Takotsubo syndrome (TTS) from anterior wall ST segment elevation myocardial infarction (STEMI). METHODS: We developed a single-channel (DCNN[2D SCI]), a multi-channel (DCNN[2D MCI]), and a 3-dimensional (DCNN[2D+t]) deep convolution neural network, and a recurrent neural network (RNN) based on 17,280 still-frame images and 540 videos from 2-dimensional echocardiograms in 10 years (1 January 2008 to 1 January 2018) retrospective cohort in University of Iowa (UI) and eight other medical centers. Echocardiograms from 450 UI patients were randomly divided into training and testing sets for internal training, testing, and model construction. Echocardiograms of 90 patients from the other medical centers were used for external validation to evaluate the model generalizability. A total of 49 board-certified human readers performed human-side classification on the same echocardiography dataset to compare the diagnostic performance and help data visualization. FINDINGS: The DCNN (2D SCI), DCNN (2D MCI), DCNN(2D+t), and RNN models established based on UI dataset for TTS versus STEMI prediction showed mean diagnostic accuracy 73%, 75%, 80%, and 75% respectively, and mean diagnostic accuracy of 74%, 74%, 77%, and 73%, respectively, on the external validation. DCNN(2D+t) (area under the curve [AUC] 0·787 vs. 0·699, P = 0·015) and RNN models (AUC 0·774 vs. 0·699, P = 0·033) outperformed human readers in differentiating TTS and STEMI by reducing human erroneous judgement calls on TTS. INTERPRETATION: Spatio-temporal hybrid DL neural networks reduce erroneous human “judgement calls” in distinguishing TTS from anterior wall STEMI based on bedside echocardiographic videos. FUNDING: University of Iowa Obermann Center for Advanced Studies Interdisciplinary Research Grant, and Institute for Clinical and Translational Science Grant. National Institutes of Health Award (1R01EB025018–01). Elsevier 2021-09-04 /pmc/articles/PMC8426197/ /pubmed/34522872 http://dx.doi.org/10.1016/j.eclinm.2021.101115 Text en © 2021 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Paper Zaman, Fahim Ponnapureddy, Rakesh Wang, Yi Grace Chang, Amanda Cadaret, Linda M Abdelhamid, Ahmed Roy, Shubha D Makan, Majesh Zhou, Ruihai Jayanna, Manju B Gnall, Eric Dai, Xuming Singh, Avneet Zheng, Jingsheng Boppana, Venkata S Wang, Feng Singh, Pahul Wu, Xiaodong Liu, Kan Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title | Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title_full | Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title_fullStr | Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title_full_unstemmed | Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title_short | Spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of Takotsubo syndrome |
title_sort | spatio-temporal hybrid neural networks reduce erroneous human “judgement calls” in the diagnosis of takotsubo syndrome |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8426197/ https://www.ncbi.nlm.nih.gov/pubmed/34522872 http://dx.doi.org/10.1016/j.eclinm.2021.101115 |
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