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Automated detection of poor-quality data: case studies in healthcare

The detection and removal of poor-quality data in a training set is crucial to achieve high-performing AI models. In healthcare, data can be inherently poor-quality due to uncertainty or subjectivity, but as is often the case, the requirement for data privacy restricts AI practitioners from accessin...

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Autores principales: Dakka, M. A., Nguyen, T. V., Hall, J. M. M., Diakiw, S. M., VerMilyea, M., Linke, R., Perugini, M., Perugini, D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8429593/
https://www.ncbi.nlm.nih.gov/pubmed/34504205
http://dx.doi.org/10.1038/s41598-021-97341-0
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author Dakka, M. A.
Nguyen, T. V.
Hall, J. M. M.
Diakiw, S. M.
VerMilyea, M.
Linke, R.
Perugini, M.
Perugini, D.
author_facet Dakka, M. A.
Nguyen, T. V.
Hall, J. M. M.
Diakiw, S. M.
VerMilyea, M.
Linke, R.
Perugini, M.
Perugini, D.
author_sort Dakka, M. A.
collection PubMed
description The detection and removal of poor-quality data in a training set is crucial to achieve high-performing AI models. In healthcare, data can be inherently poor-quality due to uncertainty or subjectivity, but as is often the case, the requirement for data privacy restricts AI practitioners from accessing raw training data, meaning manual visual verification of private patient data is not possible. Here we describe a novel method for automated identification of poor-quality data, called Untrainable Data Cleansing. This method is shown to have numerous benefits including protection of private patient data; improvement in AI generalizability; reduction in time, cost, and data needed for training; all while offering a truer reporting of AI performance itself. Additionally, results show that Untrainable Data Cleansing could be useful as a triage tool to identify difficult clinical cases that may warrant in-depth evaluation or additional testing to support a diagnosis.
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spelling pubmed-84295932021-09-10 Automated detection of poor-quality data: case studies in healthcare Dakka, M. A. Nguyen, T. V. Hall, J. M. M. Diakiw, S. M. VerMilyea, M. Linke, R. Perugini, M. Perugini, D. Sci Rep Article The detection and removal of poor-quality data in a training set is crucial to achieve high-performing AI models. In healthcare, data can be inherently poor-quality due to uncertainty or subjectivity, but as is often the case, the requirement for data privacy restricts AI practitioners from accessing raw training data, meaning manual visual verification of private patient data is not possible. Here we describe a novel method for automated identification of poor-quality data, called Untrainable Data Cleansing. This method is shown to have numerous benefits including protection of private patient data; improvement in AI generalizability; reduction in time, cost, and data needed for training; all while offering a truer reporting of AI performance itself. Additionally, results show that Untrainable Data Cleansing could be useful as a triage tool to identify difficult clinical cases that may warrant in-depth evaluation or additional testing to support a diagnosis. Nature Publishing Group UK 2021-09-09 /pmc/articles/PMC8429593/ /pubmed/34504205 http://dx.doi.org/10.1038/s41598-021-97341-0 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Dakka, M. A.
Nguyen, T. V.
Hall, J. M. M.
Diakiw, S. M.
VerMilyea, M.
Linke, R.
Perugini, M.
Perugini, D.
Automated detection of poor-quality data: case studies in healthcare
title Automated detection of poor-quality data: case studies in healthcare
title_full Automated detection of poor-quality data: case studies in healthcare
title_fullStr Automated detection of poor-quality data: case studies in healthcare
title_full_unstemmed Automated detection of poor-quality data: case studies in healthcare
title_short Automated detection of poor-quality data: case studies in healthcare
title_sort automated detection of poor-quality data: case studies in healthcare
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8429593/
https://www.ncbi.nlm.nih.gov/pubmed/34504205
http://dx.doi.org/10.1038/s41598-021-97341-0
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