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Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration

Glioma is the most common type of primary malignant tumor in the central nervous system. Tumor recurrence and progression are common in lower-grade glioma (LGG). Immune checkpoint blockade (ICB), as an emerging immunotherapy, is expected to improve the prognosis of patients undergoing conventional t...

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Autores principales: Kang, Kai, Xie, Fucun, Wu, Yijun, Han, Chang, Bai, Yi, Long, Junyu, Lian, Xin, Zhang, Fuquan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Gene & Cell Therapy 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8430277/
https://www.ncbi.nlm.nih.gov/pubmed/34553030
http://dx.doi.org/10.1016/j.omto.2021.07.011
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author Kang, Kai
Xie, Fucun
Wu, Yijun
Han, Chang
Bai, Yi
Long, Junyu
Lian, Xin
Zhang, Fuquan
author_facet Kang, Kai
Xie, Fucun
Wu, Yijun
Han, Chang
Bai, Yi
Long, Junyu
Lian, Xin
Zhang, Fuquan
author_sort Kang, Kai
collection PubMed
description Glioma is the most common type of primary malignant tumor in the central nervous system. Tumor recurrence and progression are common in lower-grade glioma (LGG). Immune checkpoint blockade (ICB), as an emerging immunotherapy, is expected to improve the prognosis of patients undergoing conventional treatment, but it currently performs poorly in glioma. We divided patients into genome-stable and -unstable groups according to the somatic mutation count and then found that the expression of CDC20 was positively correlated with genomic instability. We compared the differences in long non-coding RNA (lncRNA) expression and immune infiltration between the two groups. Five lncRNAs and three immune cell types were identified to construct risk models and a nomogram combing clinical features. Through internal and external validation, the models exhibited sufficient ability to predict the prognosis and the possible response to ICB therapy of patients. This study provided a potential predictive approach for the precise application of ICB and support for improving the prognosis of LGG patients.
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spelling pubmed-84302772021-09-21 Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration Kang, Kai Xie, Fucun Wu, Yijun Han, Chang Bai, Yi Long, Junyu Lian, Xin Zhang, Fuquan Mol Ther Oncolytics Original Article Glioma is the most common type of primary malignant tumor in the central nervous system. Tumor recurrence and progression are common in lower-grade glioma (LGG). Immune checkpoint blockade (ICB), as an emerging immunotherapy, is expected to improve the prognosis of patients undergoing conventional treatment, but it currently performs poorly in glioma. We divided patients into genome-stable and -unstable groups according to the somatic mutation count and then found that the expression of CDC20 was positively correlated with genomic instability. We compared the differences in long non-coding RNA (lncRNA) expression and immune infiltration between the two groups. Five lncRNAs and three immune cell types were identified to construct risk models and a nomogram combing clinical features. Through internal and external validation, the models exhibited sufficient ability to predict the prognosis and the possible response to ICB therapy of patients. This study provided a potential predictive approach for the precise application of ICB and support for improving the prognosis of LGG patients. American Society of Gene & Cell Therapy 2021-07-29 /pmc/articles/PMC8430277/ /pubmed/34553030 http://dx.doi.org/10.1016/j.omto.2021.07.011 Text en © 2021 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Original Article
Kang, Kai
Xie, Fucun
Wu, Yijun
Han, Chang
Bai, Yi
Long, Junyu
Lian, Xin
Zhang, Fuquan
Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title_full Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title_fullStr Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title_full_unstemmed Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title_short Genomic instability in lower-grade glioma: Prediction of prognosis based on lncRNA and immune infiltration
title_sort genomic instability in lower-grade glioma: prediction of prognosis based on lncrna and immune infiltration
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8430277/
https://www.ncbi.nlm.nih.gov/pubmed/34553030
http://dx.doi.org/10.1016/j.omto.2021.07.011
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