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Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions

The biology and chemistry of proteins and peptides are inextricably linked with water as the solvent. The reason for the high stability of some proteins or uncontrolled aggregation of others may be hidden in the properties of their hydration water. In this study, we investigated the effect of stabil...

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Autores principales: Panuszko, Aneta, Pieloszczyk, Maciej, Kuffel, Anna, Jacek, Karol, Biernacki, Karol A., Demkowicz, Sebastian, Stangret, Janusz, Bruździak, Piotr
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2021
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8431001/
https://www.ncbi.nlm.nih.gov/pubmed/34502252
http://dx.doi.org/10.3390/ijms22179350
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author Panuszko, Aneta
Pieloszczyk, Maciej
Kuffel, Anna
Jacek, Karol
Biernacki, Karol A.
Demkowicz, Sebastian
Stangret, Janusz
Bruździak, Piotr
author_facet Panuszko, Aneta
Pieloszczyk, Maciej
Kuffel, Anna
Jacek, Karol
Biernacki, Karol A.
Demkowicz, Sebastian
Stangret, Janusz
Bruździak, Piotr
author_sort Panuszko, Aneta
collection PubMed
description The biology and chemistry of proteins and peptides are inextricably linked with water as the solvent. The reason for the high stability of some proteins or uncontrolled aggregation of others may be hidden in the properties of their hydration water. In this study, we investigated the effect of stabilizing osmolyte–TMAO (trimethylamine N-oxide) and destabilizing osmolyte–urea on hydration shells of two short peptides, NAGMA (N-acetyl-glycine-methylamide) and diglycine, by means of FTIR spectroscopy and molecular dynamics simulations. We isolated the spectroscopic share of water molecules that are simultaneously under the influence of peptide and osmolyte and determined the structural and energetic properties of these water molecules. Our experimental and computational results revealed that the changes in the structure of water around peptides, caused by the presence of stabilizing or destabilizing osmolyte, are significantly different for both NAGMA and diglycine. The main factor determining the influence of osmolytes on peptides is the structural-energetic similarity of their hydration spheres. We showed that the chosen peptides can serve as models for various fragments of the protein surface: NAGMA for the protein backbone and diglycine for the protein surface with polar side chains.
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spelling pubmed-84310012021-09-11 Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions Panuszko, Aneta Pieloszczyk, Maciej Kuffel, Anna Jacek, Karol Biernacki, Karol A. Demkowicz, Sebastian Stangret, Janusz Bruździak, Piotr Int J Mol Sci Article The biology and chemistry of proteins and peptides are inextricably linked with water as the solvent. The reason for the high stability of some proteins or uncontrolled aggregation of others may be hidden in the properties of their hydration water. In this study, we investigated the effect of stabilizing osmolyte–TMAO (trimethylamine N-oxide) and destabilizing osmolyte–urea on hydration shells of two short peptides, NAGMA (N-acetyl-glycine-methylamide) and diglycine, by means of FTIR spectroscopy and molecular dynamics simulations. We isolated the spectroscopic share of water molecules that are simultaneously under the influence of peptide and osmolyte and determined the structural and energetic properties of these water molecules. Our experimental and computational results revealed that the changes in the structure of water around peptides, caused by the presence of stabilizing or destabilizing osmolyte, are significantly different for both NAGMA and diglycine. The main factor determining the influence of osmolytes on peptides is the structural-energetic similarity of their hydration spheres. We showed that the chosen peptides can serve as models for various fragments of the protein surface: NAGMA for the protein backbone and diglycine for the protein surface with polar side chains. MDPI 2021-08-28 /pmc/articles/PMC8431001/ /pubmed/34502252 http://dx.doi.org/10.3390/ijms22179350 Text en © 2021 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Panuszko, Aneta
Pieloszczyk, Maciej
Kuffel, Anna
Jacek, Karol
Biernacki, Karol A.
Demkowicz, Sebastian
Stangret, Janusz
Bruździak, Piotr
Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title_full Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title_fullStr Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title_full_unstemmed Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title_short Hydration of Simple Model Peptides in Aqueous Osmolyte Solutions
title_sort hydration of simple model peptides in aqueous osmolyte solutions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8431001/
https://www.ncbi.nlm.nih.gov/pubmed/34502252
http://dx.doi.org/10.3390/ijms22179350
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